Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02034 ATGTATGCGATTGGGGGGAGTGGGGGACCCACGATTAACAGTCAGGGGAACCGTTATACGGCTCCTGAGGATGGTTTTGCTAAGGAGGTTACGAAGAGTGGTCTTGTTGCTATTATCGCTGGGCTGTTTGGAAATGTCCTTGTTGATATGTTGGCTCTTGGACCTGTGGCCCCATTTGATGCTGCTTCATGTTTTCCTGCAATTGGTATGGCCGTCATATTATCTACGTGGGCAGAAAATTATGGGGATCCTATCGAGAGCAAGGACTTGCTTACCCAATTCGTGGAAGTCTTCTTTGTGGCCATTGCTTGTGATGAAAAATAG 324 0.4722 MYAIGGSGGPTINSQGNRYTAPEDGFAKEVTKSGLVAIIAGLFGNVLVDMLALGPVAPFDAASCFPAIGMAVILSTWAENYGDPIESKDLLTQFVEVFFVAIACDEK* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02034 107 PANTHER SAM (S-ADENOSYL METHIONINE) TRANSPORTER 24 107 IPR008509 GO:0015098|GO:0015689|GO:0016020
Rops5g02034 107 Pfam Sugar-tranasporters, 12 TM 28 107 IPR008509 GO:0015098|GO:0015689|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02034 Rops-Chr5 43191450 43192084 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02034 1 32 Polysaccharide Lyase AT3G53190 87.500 2.63e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02034 K24175 - jre:108989590 116.316