Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02021 ATGGAAGTAAGCCTCACTTTTATTATCATGGCCATTTCCTTCGGACCAGGTGGTAAGACCGTCTTGGGTGCTCTATGTGCTCTTGCCGGTGGCATCTCTTTTGCATTCTGGCTAATTATTCAGGCAAAGTTGAGTAAAAGATACCCAAGTCATTACTCAAGCACTGCGTTGATGTCTTTCTGGGCGTCACTGCTATCCATTCTGTTGGCTCTTTGCTTTGAGAGGGATTTGAGTCAGTGGAGGTTGGGTTGGAATGTTAGGCTTCTAACTGTTGCTTATGCGGGTATAGTGGTTTCTGGAGTAGTGGTGGTTGTGATTTCTTGGTGTATACGCATGAGAGGCCCGTTGTTTGCCTCTGTTTTTAACCCTCTAGTGCTTGTTCCAATTGCTGATAAGTTATTACCCGAGAGTTTTCAAGATTTGGCTGGATTCAACCTTAACTCTGACGAGAATTTAGAAGAAAAGGAAAAGCTGGTTTTCATATGCTCATGTGCTATAGAGTGTGTCAAAGGTGGTGGTTCAGTTCTTATTCCTATTGATCGACTTGGAACCATTTTGCAGCTTTTGGAGGAAATGACAACATCACTTGAAGCTTCAGCAATGGGCAGCTTTGTAGGCATTTACAATAGCAACATTAACGGATGA 645 0.431 MEVSLTFIIMAISFGPGGKTVLGALCALAGGISFAFWLIIQAKLSKRYPSHYSSTALMSFWASLLSILLALCFERDLSQWRLGWNVRLLTVAYAGIVVSGVVVVVISWCIRMRGPLFASVFNPLVLVPIADKLLPESFQDLAGFNLNSDENLEEKEKLVFICSCAIECVKGGGSVLIPIDRLGTILQLLEEMTTSLEASAMGSFVGIYNSNING* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02021 214 Gene3D - 155 211 - -
Rops5g02021 214 PANTHER WAT1-RELATED PROTEIN 19 129 IPR030184 GO:0016020|GO:0022857
Rops5g02021 214 SUPERFAMILY Metallo-hydrolase/oxidoreductase 151 201 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02021 Rops-Chr5 42759889 42761656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02021 20 130 Nodulin-like Gene Family AT1G68170 50.450 1.65e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02021 - - vra:106774988 164.081