Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02018 ATGGCCACCAACTCAGCCATCACTCTCCTCGCCCTCTTTGCGTTTCTGGTCGACAGCATGAGGACGTATCTATGGTCTCTTACCTTTGGGCTTGAGGAAAGGAAAGTCAAAAGGTGTGGTTCAGAACAGTGGACGCATCATCGCTTGCTCACCCAAGAGCTTAGAGAACGTGTGGTCAATATAAGTGGATGGCAACACGAGGTGTGGAGGAAGAAAGTTTGGTTCAGAGTTTTCCCAAAGGAGCTTCAAAGAGATGATAAATGCCATCTCCGTTGGCTTTAG 282 0.4823 MATNSAITLLALFAFLVDSMRTYLWSLTFGLEERKVKRCGSEQWTHHRLLTQELRERVVNISGWQHEVWRKKVWFRVFPKELQRDDKCHLRWL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02018 93 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02018 Rops-Chr5 42685122 42685403 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02018 6 90 Ion Channels AT5G57940 47.727 7.54e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02018 K05391 - atri:130804484 76.6405