Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02008 ATGGAATCCCAATCAAGAGCTTCTGCTTCTCGAAATCCCTCTCAGTTGTCATGGGTAAACCTCTCTAGGAATTTACTGTTAGCGTATCAGAGCTTTGGTGTAGTGTATGGAGATCTAAGCACATCACCTCTCTATGTTTATAAAAACACATTTCAAGGAAAGATGCGCAACCACCATGATGAAGAAACTATCTTTGGTGCTTTTTCGTTGATTTTCTGGACGCTTACATTAATACCTTTGCTTAAATATGTATTCATCCTATTGAGTGCTGATGATAATGGTGAAGGTGGGACATTTGCTCTCTATTCCCTGCTCTGTAGGCATGCCAAGTTTAATTTACTCCCTAATCAACAAGCAGCTGATGAGGAGTTGTCATCCTACAAATATGGTCCCACATCACAGACTGTAGCCCCATCGCCACTGAAGAGGTTTCTGGAGAAGCATAAAAGGTCAAGAACGGCCCTGCTTGTTGTGGTATTGTTTGGTGCTTGCATGGTTATAGGTGATGGAGTGCTTTCACCAGCAATTTCAGTTTTAGCATCAGTATCAGGAATACAAGTTACAGAACCAAAAATCACAAATGGTGAACTTGTCCTGCTAGCCTGTGTCATATTGGTTGGCCTGTTTGCTCTCCAACATTGTGGCACACACAAAGTTGCATTTATGTTTGCTCCAATTGTAATCATCTGGCTTGTATCCATTTTTTCTGTTGGGCTTTATAATACAATACATTGGAATCCAAAAATTGTCCATGCTATGTCCCCGCACTATATCATCAAGTTCTTTATCAAGACTGGCAAAGATGGCTGGATTTCTCTTGGAGGGTTACTTCTCTGTATTACTGGAACTGAAGCTATGTTTGCAGATCTTGGTCATTTCACTGCTTTGTCAATAAGGCTTGCATTTGCCTTTGTTATATACCCTTGTTTGGTAATACAGTACATGGGTCAAGCGGCTTTTTTGTCTAAAAATCTCCAGTCTGTTCATAACAGTTTTTATGACTCAATACCTGGTCCTGTATTTTGGCCTGTCTTTGTTATTGCCACCCTTGCAGCTATTGTTGGGAGTCAAGCCGCTATCACTGCCACTTTCTCCATCATCAAGCAGTGTCATGCACTTGGTTGTTTTCCTCGTGTCAAAGTTGTACACACCTCAAAACATATGTTTGGACAGATCTACATCCCAGAAATAAACTGGATACTTATGATCCTGACTCTTGCCGTAACCATTGGATTTCAGGACACAACCTTAATTGGAAATGCTTTTGGACTTGCTTGTATGACAGTTATGTTTGTGACTACATTTCTGATGGCGCTAGTCATAATCTTTGTCTGGCAGAAAAGCATCCTGATTGCTGCAATATTCCTTTTATTCTTTTGGGTGATCGAGGGTGTATATCTATCAGCAGCATTCATAAAAGTGCATAAGGGAGGATGGGTTCCTCTTGTCTTATCCTTCGTCTTTCTGATTGTCATGTATGTATGGCATTATGGTACTCGTAGGAAGTACAGCTATGATCTACGCAACAAAGTTTCATTGAAATGGTTACTGGGTTTGGGCCCTAGCTTTGGTATTGTCCGTGTCCCAGGGATAGGTCTGATCTACTCAGAACTTGCCACAGGGGTACCTGCAATATTTTCCCACTTCGTAACCAACCTCCCTGCATTTCATAATGTGGTGGTTTTTGTTTGTGTAAAATCAGTTCCTGTTCCATATGTCTCACCTGAAGAACGTTTCCTGATCGGGCGAGTTTGTCCAAAACCACATCGTATGTACAGGTGCATTGTTAGATATGGGTACAAGGACATTAAAAAGGATGATGGAGACTTTGAGAACCAGCTCATACAAAGTATAGTGGAGTTTATCCAGATGGAGGCAGTGGAACCACAGTTCTCAAGTTCTGAAGCTTCTTCACTTGATGGGAGGATGGCTGTTATAAGTACTAGAAGCTTAGAATCAGCTTCAAATTTGATAGTGTCTGAGCATGAAAATGTTGGTGTGGACAATAACATCCCTAGCAGCAAATCTATAACCCTGCGACGTTTGCAATCCATTTATGATGATGAAAACCCACAACCAAGAACGCGTCGAGTAAGATTTCAGGTACCTAACAATCCTGGTTTTGATCGTGCTGTTAGGGAAGAGCTTTCAGATTTAATTGAAGCAAAGGAGGCTGGGGTTGCATATATAATGGGGCACTCATATGTGAAAGCAAGGAAATCATCCTCATTCTTGAAAAAGCTTGTGATTGATATTGGATACTCATTTCTAAGGAAGAATTGCAGGAGCCCAGCTGTGGCTCTTAACATTCCTCACATCAGTCTAATTGAAGTTGGAATGATATATTATGTCTAG 2355 0.4102 MESQSRASASRNPSQLSWVNLSRNLLLAYQSFGVVYGDLSTSPLYVYKNTFQGKMRNHHDEETIFGAFSLIFWTLTLIPLLKYVFILLSADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPTSQTVAPSPLKRFLEKHKRSRTALLVVVLFGACMVIGDGVLSPAISVLASVSGIQVTEPKITNGELVLLACVILVGLFALQHCGTHKVAFMFAPIVIIWLVSIFSVGLYNTIHWNPKIVHAMSPHYIIKFFIKTGKDGWISLGGLLLCITGTEAMFADLGHFTALSIRLAFAFVIYPCLVIQYMGQAAFLSKNLQSVHNSFYDSIPGPVFWPVFVIATLAAIVGSQAAITATFSIIKQCHALGCFPRVKVVHTSKHMFGQIYIPEINWILMILTLAVTIGFQDTTLIGNAFGLACMTVMFVTTFLMALVIIFVWQKSILIAAIFLLFFWVIEGVYLSAAFIKVHKGGWVPLVLSFVFLIVMYVWHYGTRRKYSYDLRNKVSLKWLLGLGPSFGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHNVVVFVCVKSVPVPYVSPEERFLIGRVCPKPHRMYRCIVRYGYKDIKKDDGDFENQLIQSIVEFIQMEAVEPQFSSSEASSLDGRMAVISTRSLESASNLIVSEHENVGVDNNIPSSKSITLRRLQSIYDDENPQPRTRRVRFQVPNNPGFDRAVREELSDLIEAKEAGVAYIMGHSYVKARKSSSFLKKLVIDIGYSFLRKNCRSPAVALNIPHISLIEVGMIYYV* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02008 784 NCBIfam potassium uptake protein 27 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
Rops5g02008 784 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 19 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
Rops5g02008 784 Pfam K+ potassium transporter 29 602 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02008 Rops-Chr5 42447866 42457603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g02008 3 784 Inorganic Solute Cotransporters AT3G02050 77.608 0.0 1224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02008 K03549 - gmx:100776888 1373.99