Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01986 ATGGTTAATGCAATAAAGGTCGCAATTGGAGATGCAGTTTTGACTTTCATGTGGGTCTTTGTCTCTTCTACTTTGGGATTGGTCACCAACTTCATAATCAAAGAGCTTGATCTTCATCATTGGTCTTACAATGGTGTTGATTACCCTTCAATTATGATCACCACTTTTCTCATATTTGTACTTGTTTTCATCTTCACCATCATTGGCAATGCATTGGGTGGTGCCATCAACAACCCCACCGCTAATGCTTCCTTCTATGCAGCTGGTCATGGCTCAGACACCCTTTTCTCAATGGCTCTACGTTTCCCAGCTCAGGCGCTAGGTGCAGTGGGTGGTGCTGTGGCAATTATGGAGGTGATGCCACCAAAATACAGGCACATGATTGGAGGGCCTTCTTTGAAGGTTGACTTGCATACTGGGGCTATTGCAGAAGGGGTGTTGACATTTCTGATCACTTTTGCTGTTCTCTTCATCATGCTAAGGGGTCCTCGTAGTGAGTTGATGAAGACTTGGTTGATGTCAATGGCAACCGTGGCTTTGATCCTTGCCGGTGCTGCTTACACAGGACCATCCATGAATCCTGCATTGGCTTTTGGTTGGGCATACTTAGACAACTGGCACAACACGTGGGACCAATTCTATGTTTACTGGATTTGCCCCTTCATTGGATCAATACTTGCTGCTTGGCTGTTCCGTATTGTCTTTCCCCCACCAGTGGTAAAACAGAAGAGAGCCTGA 738 0.458 MVNAIKVAIGDAVLTFMWVFVSSTLGLVTNFIIKELDLHHWSYNGVDYPSIMITTFLIFVLVFIFTIIGNALGGAINNPTANASFYAAGHGSDTLFSMALRFPAQALGAVGGAVAIMEVMPPKYRHMIGGPSLKVDLHTGAIAEGVLTFLITFAVLFIMLRGPRSELMKTWLMSMATVALILAGAAYTGPSMNPALAFGWAYLDNWHNTWDQFYVYWICPFIGSILAAWLFRIVFPPPVVKQKRA* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01986 245 PANTHER AQUAPORIN SIP1-1 3 243 IPR044222 GO:0015250
Rops5g01986 245 FunFam Aquaporin SIP1-1 2 245 - -
Rops5g01986 245 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops5g01986 245 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops5g01986 245 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops5g01986 245 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops5g01986 245 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops5g01986 245 SUPERFAMILY Aquaporin-like 4 238 IPR023271 -
Rops5g01986 245 Gene3D Glycerol uptake facilitator protein. 2 243 IPR023271 -
Rops5g01986 245 Pfam Major intrinsic protein 3 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01986 Rops-Chr5 41896437 41902408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01986 2 244 Major Intrinsic Protein MIP AT5G18290 53.061 3.14e-81 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01986 K09875 - gmx:100788738 385.956