Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01985 ATGCTTAAACGCTCCGGCCGCCAGCCACCGCTGGTGACGGAGTCGTTATACGACAAGATCTACCAGTTCCGTGGCGGATTGCTGATGGTGGCGCTCCCTCTCCTCCTCGTAACGCTCGTGCTTTATCTCAATCCTTCCACATCTTCCAACGAGTCCATCGAAGACTATGCACTCACGCACCGGAAGATCTCCCCCGATCGCAAATTCTCCGGCTCCTTCGCCGTCATCTTCGACGCCGGTAGCTCCGGCAGCCGCGTCCACGTTTTCCGTTTCGATCAGAACCTGGATCTCGTTCACATTGGCAAAGATCTCGAACTTTTCATTCAGATTAAACCTGGTTTGAGTGCTTATGCACAGAATCCACAACAGGCAGCGGAATCTCTGGTTACTCTTTTGGATAAAGCTGAAAGTGTTGTTCCTTTGGAGTTTCGTCCCAAGACACCCGTTAGAGTTGGGGCAACTGCAGGTTTGAGGGCTTTGGAAGGGGATGCTTCTGATAGGATTTTGCAAGCGGTTCGAGATGTGCTTAAGCAAAGAAGCACTCTGAAATCTGAGCCTGATGCTGTTACTGTGCTGGATGGAACCCAAGAAGGTGCTTTTCAATGGGTGACTATTAACTATCTACTGGGAAACTTGGGAAAAGATTATTCAGAGACTGTTGGGGTAGTTGATCTTGGAGGAGGATCTGTTCAAATGGCATATGCCATCTCAGAGACAGCTGCTGCCAAGGCTCCAAAACTACCAGCTGGAGAGGACCCATATGTCAAGGAGATGTTCCTAAGGGGAAGGAAATATTACCTCTATGTTCACAGTTACTTGCGCTATGGTTTACTAGCAGCTCGTGCGGAGATATTAAAGGTTTCTGATGATTCTGGAAACCCCTGCATCTTAGCTGGCTTTGATGGATCTTACAATTATGGGGGGAAGCCATTGAAGGCCTCATCCTCCCCTTCTGGCTCAAGTTTGAATGAATGCAAAAGCATAGCTATTAAGGCTCTCAAGGTTAATGAGTCAACATGTACTCGCATGAAGTGCACTTTCGGTGGGATATGGAATGGTGGTGGTGGGGATGGACAGAAAAACCTTTTTGTTGCCTCATTTTTCTTTGACCGGGCTGCTGAGGCTGGTTTTGCTGATCCAAACTCACCCGTTGTGAAAGTCCATCCTGTGGATTTTGAGAATGCAGCCAAGCAAGCTTGTCAAACAAAACTTGAGAATGCCAAATCCACTTATCAACATGTTGAGGAGGGGAACCTTCCATATTTATGCATGGATCTTGTATACCAGCATACATTACTCATTGCTGGATTCGGCCTAGATCCATTGCAGCAGATTACATTAGTGAAGAAAGTTAAATATCAGGATGCTCTTGTTGAAGCTGCATGGCCCCTAGGCAGTGCCATAGAAGCTGTATCATCTACATAA 1425 0.4723 MLKRSGRQPPLVTESLYDKIYQFRGGLLMVALPLLLVTLVLYLNPSTSSNESIEDYALTHRKISPDRKFSGSFAVIFDAGSSGSRVHVFRFDQNLDLVHIGKDLELFIQIKPGLSAYAQNPQQAAESLVTLLDKAESVVPLEFRPKTPVRVGATAGLRALEGDASDRILQAVRDVLKQRSTLKSEPDAVTVLDGTQEGAFQWVTINYLLGNLGKDYSETVGVVDLGGGSVQMAYAISETAAAKAPKLPAGEDPYVKEMFLRGRKYYLYVHSYLRYGLLAARAEILKVSDDSGNPCILAGFDGSYNYGGKPLKASSSPSGSSLNECKSIAIKALKVNESTCTRMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNSPVVKVHPVDFENAAKQACQTKLENAKSTYQHVEEGNLPYLCMDLVYQHTLLIAGFGLDPLQQITLVKKVKYQDALVEAAWPLGSAIEAVSST* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01985 474 CDD NBD_sugar-kinase_HSP70_actin 75 234 - -
Rops5g01985 474 FunFam Apyrase 1 193 452 - -
Rops5g01985 474 Gene3D - 73 468 - -
Rops5g01985 474 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 192 207 IPR000407 GO:0016787
Rops5g01985 474 Gene3D Exopolyphosphatase. Domain 2 193 452 - -
Rops5g01985 474 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 19 473 IPR000407 GO:0016787
Rops5g01985 474 Pfam GDA1/CD39 (nucleoside phosphatase) family 71 473 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01985 Rops-Chr5 41882493 41892388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01985 14 473 Calmodulin-binding Proteins AT3G04080 68.478 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01985 K14641 - gmx:100804818 778.089