Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01978 ATGGAGTCCACTAGCTTGATCAGTTGCGACAATGGCTTAAAGAAGCAAGGAGCAGGGAGCAAGAAGGATTGCACAATGGAAGCTCATTCATTAGAAGGTGTCTTATGCTCAACCAACGTGTGTGCTGAGTCGAACCAAAGCTTTGGATGGCCTAGGACTTCTGCACCCACACTTAACAGCACGTCCCATGAGCTTGGTCACGGTCATGAGGGAGAGAAGATTGTTCTTAGAGGAAACGAATATGTGCTCTTGGGTGCTGCTATTATGAGTGTTGTTGCTTCAAGGAGATATCGTAGCCTTAGCAAGACCATGAAAGTCCTGAATGCAGCTGCAGAGACTTGTGAGATCTTCAACTACCACATTCCCAAAGGTGCAACTCTTTTGGTCAATGTTTGGGCCATAGCTCGTGACCCCAAGGAATGGCATAACCCATTGAAGTTCAGGCCCGAAAGGTTCCTCCCCGGTGGTGAGAAGGTTCATGTTAGGGGCAATGACTTTGAGGCTGTACCCTTTGGTGTTGGACGTAGAATATGTGCTGGTATGAGCCTGGGGCTTGGGATGGTTCAACTTCTCACTGCAACGTTGGCGCATGCATTCGCATGGGAGCTCACAACACATGCACATGGGTGTCGGACGTTGTCGCATGTTGAGAGGATGTTCATGAAGGTGATTCAATTGGTCTCTAGAAGGGGGGTTGAATAG 702 0.4872 MESTSLISCDNGLKKQGAGSKKDCTMEAHSLEGVLCSTNVCAESNQSFGWPRTSAPTLNSTSHELGHGHEGEKIVLRGNEYVLLGAAIMSVVASRRYRSLSKTMKVLNAAAETCEIFNYHIPKGATLLVNVWAIARDPKEWHNPLKFRPERFLPGGEKVHVRGNDFEAVPFGVGRRICAGMSLGLGMVQLLTATLAHAFAWELTTHAHGCRTLSHVERMFMKVIQLVSRRGVE* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01978 233 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 107 206 - -
Rops5g01978 233 SUPERFAMILY Cytochrome P450 109 206 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01978 233 Gene3D Cytochrome P450 95 223 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01978 233 Pfam Cytochrome P450 96 207 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01978 233 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 171 180 IPR017972 GO:0005506|GO:0016705
Rops5g01978 233 PRINTS E-class P450 group I signature 178 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01978 233 PRINTS E-class P450 group I signature 168 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01978 233 PRINTS E-class P450 group I signature 130 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01978 Rops-Chr5 41739088 41740083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01978 79 203 Cytochrome P450 AT5G07990 55.469 1.34e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01978 K05280 - gmx:547475 168.703