Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01945 ATGCAACAATTCACAGATGTTTCAGCACAATTGCAGAAATCACTATCTGAGGCACTAACCATTTTCTACCCTCTTGGAGGTAGAAGAAGTGACCCCTTCTCCATTGATTGCAACGATGAAGGTGTAATTTACATGGAAACTTCAATAAATATGAACATGGAAGACTTCCTAAAACCACCCAAATTAGAATTGATAAACAAACTGCTTCCATGTGAGCCAAACAAGATGCACCCTCATCAAGAAGTCTTGCCCCAACTACAAGTCCAAGTGAACATTTTCAAGTGTGGAGGGATAGCTATTGGCATGTGCAATCTCCACACCATCCTAGATGCATGCTCTTGCAGTGCCTTCTTGAAAACTTGGTCTGCAATTTGCAAAGGATCAAGGGATGAAATATCATGGCCAGATTTCTCTTCTGCTTCTTCTTTCTTCCCTCCAAGAAACACCTTTGGTGTACGTGCTGGTGTGCTGAATATTAACAGAGACTCAAATGTAGAAGCAAATTGCACCACAAGAAGATTCTTGTTCAATACCAAATCCATCAATGACCTCAAAGCCAAATTAGAAAATGATGGAATCTTTACAAAGCCTACTCGTTACCAAGCAGTGTCTTCATTCATTTGTAAACACATGATTGTAGCATGCATGATGGAATCTTGTGACAACAACAGGCCAGTGGTAGTGTTACACGTTGTGGACATGAGGAGAAGGATGGGAGAGCCATTCTCACAAGACTCTATTGGAAACTTGTTGTGGCCTGCACTGTTGCATTTTGAGAATGTCAATAAGAACACTGATATTAGAGATTTGGTCACAATTTTGGAAAAAGAAATTGGAAAGCTCACAAAGGAATTGTTTCTAAAAGTGCAAAATGATCCTGGTTTTCTATGGAGTGATGAGTGTGCTGAACTAATGCTTGAAGGGATAGCCACTAAAAACCCAATTTCATTTGTGTTCACTAGCTGGGCAAATATGGGATTCACAGAATTGAACTTTGGTTGGGGAAAGCCTTTATGGCTGGCTCAAAGAGGAGGTACTAAAGAAACTATTCCAAACACAGTAGTGTTGATGGAAACAAACGAGGGAATAGAGGCTTGGGTGACAATGGCAGAGAAACATATAGCTATCTTGGAGAATGATGTGGACTTCCTCAGATTAGCATTGCTTAATCCTAGTGTTTCAAACATATAG 1191 0.4013 MQQFTDVSAQLQKSLSEALTIFYPLGGRRSDPFSIDCNDEGVIYMETSINMNMEDFLKPPKLELINKLLPCEPNKMHPHQEVLPQLQVQVNIFKCGGIAIGMCNLHTILDACSCSAFLKTWSAICKGSRDEISWPDFSSASSFFPPRNTFGVRAGVLNINRDSNVEANCTTRRFLFNTKSINDLKAKLENDGIFTKPTRYQAVSSFICKHMIVACMMESCDNNRPVVVLHVVDMRRRMGEPFSQDSIGNLLWPALLHFENVNKNTDIRDLVTILEKEIGKLTKELFLKVQNDPGFLWSDECAELMLEGIATKNPISFVFTSWANMGFTELNFGWGKPLWLAQRGGTKETIPNTVVLMETNEGIEAWVTMAEKHIAILENDVDFLRLALLNPSVSNI* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01945 396 Gene3D - 166 385 IPR023213 -
Rops5g01945 396 PANTHER F21J9.9 6 385 - -
Rops5g01945 396 Pfam Transferase family 7 383 - -
Rops5g01945 396 Gene3D - 1 154 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01945 Rops-Chr5 41194953 41196143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01945 11 379 Monolignol Biosynthesis Gene Families AT5G48930 23.980 1.05e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01945 - - gmx:102667966 625.55