Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01940 ATGGATTTGACAGCGGAGAAGAAGGAATTAGAGAACAACAACAGCAGTAACCCAGAAAGTGCACTTCAAATCTCAGATTCTTCTTCTCAATTGGCACCTGATGCTAACAATAACAAAGAAGCCGAAGAGCGAAAAGCGCGTGACCTCAAAGCTGGTCTTCACCCCTTAAAGCACAAATTTGTATTTTGGTACACGCGTCGAACACCTGGAGTTCGAAATCAGACATCATATGAGGACAACATAAAGAAAATTGTTGATTTCAGTACGGTTGAAGGATTTTGGGTCTGCTATTGCCATCTCGCTCGTCCTTCTACTTTACCTAGTCCAACAGATTTGCACCTTTTTAAAGAAGGGATTCGTCCTTTATGGGAGGACTCTGCTAACTGCAATGGTGGTAAATGGATTATACGATTCAAAAAGGCTGTCTCAGGTCGTTTTTGGGAGGACCTGGTTCTTGCCTTAGTGGGTGACCAAGTAGATTATGGGGATAACATATGTGGTGCAGTACTAAGCATTCGTTTCAATGAGGATATATTGAGTGTCTGGAATCGCAATGCATCTGATCATCAAGCTGTGATGGCTCTGAGAGATTCAATTAAACGGCACTTAAAGCTTCCTCACAGCTATGTTATGGAGTACAAGCCCCATGATGCTTCTCTGCGAGACAATTCATCTTACAGGAACACTTGGTTGAGAGGCTAG 702 0.4288 MDLTAEKKELENNNSSNPESALQISDSSSQLAPDANNNKEAEERKARDLKAGLHPLKHKFVFWYTRRTPGVRNQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSTLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKAVSGRFWEDLVLALVGDQVDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01940 233 MobiDBLite consensus disorder prediction 14 36 - -
Rops5g01940 233 MobiDBLite consensus disorder prediction 1 47 - -
Rops5g01940 233 SUPERFAMILY eIF4e-like 33 229 IPR023398 -
Rops5g01940 233 Pfam Eukaryotic initiation factor 4E 55 213 IPR001040 GO:0003723|GO:0003743|GO:0006413
Rops5g01940 233 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 32 222 IPR001040 GO:0003723|GO:0003743|GO:0006413
Rops5g01940 233 ProSitePatterns Eukaryotic initiation factor 4E signature. 111 134 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Rops5g01940 233 FunFam Eukaryotic translation initiation factor NCBP 26 226 - -
Rops5g01940 233 Gene3D RNA Cap, Translation Initiation Factor Eif4e 27 226 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01940 Rops-Chr5 40923205 40933490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01940 41 233 Eukaryotic Initiation Factors Gene Family AT5G18110 84.456 8.98e-126 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01940 K03259 - gmx:100499744 414.846