Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01928 ATGGCTGTGACCATTACATCTTCTTACACGGTCATTCCCTCCGAAACCACTCCAAATGATAGTGTGTTGTTGTGTGAGAGTGAACAAATCAATGCTCACTCTCACTCACTCACCATCTATGTCTACAACTCAAATCACAAGCCTAATTTCAAAACCCCCAACATTATTGACACAATGAGAGACTCTCTTGGCAAGATCTTAGTTCACTACTACCCACTTGCTGGAAGGTTACACATGATAAGAGGTGGAAGATTGGAAGTGGAGTGCAATTCAAAAGGTGTGAAATTGTTGGAAGCTGAATCCACAAAAACACTTGATGAGTATGGTGACTTTGAACCCAATGACACCATCATGGAGCTTATCCCAAAGGTTGATTATAGTGAACCTATGGAGGAGTTGCCACTTTTGTTGGTGCAAGTGACAAAATTCACTTGTGGTGGGTTTTGTGTTGGTGTTGCCATTTCAAATGTCATTGTTGATGGAATTGCTGGTACTCTCTTTTTTGATTCGTGGGCTAAGCTGGCTCGAGGAGGTACCCTTGAGGAAGGTGAGATGCCAATTTTGAACCGAAGGGTTCTTATGAGATCAGAGGAAAGTCTCAACATGGCACCTAGGTTTGATCATCCAGAGTTCAAGCCTTTGCCTCTTGTACTGGGAAACACTGATGCCAAAGTGGAGCGTGAGAAGGAGACAACCCTTGCAATGATGAAGCTCACGAGGGAGATGGTGGAGAAGCTGAAAAAGAAAGCCAATGAGTTGATGGAAGATGATGCGAGCCAGGGGCAGAAGGTTTTCAGTTCTAGTTCTGCTACTTATGAGAATGCTGCGGTGCAGGGAAGAAGACCTTACAGCAGATATGAAAGCATTTCTGCTCATATATGGAGGAGTGCGTGCAAGGCTCGCCAAAATTATCACAATCAACCAACCGTAGTTTACATTGTTGCTGGTACTCGAAACAGACTAAAGCCACCTCTCCCTTTAAACTATTTTGGAAACGCCACACATCCAACAGTCACACCCACATGCCTCAGTGGGGACATTGTGTCAAAACCATTGAGCTATGTGGCACAAAAGATTAGGGAAGCTATTGAAGTGTTAACAAATGAGTATTTAACATCTGCTTTTGAATTTATTGGGAATCAGCATAATGTGGGGTGGCTTAGGGGCACCTTGAATAAACAAGGTATCATGGAAGCTCCATTTCTTGGGAATCCTAACCTGAACATTTGGAGTTGGATGAGTAATATGCCTACGTATGGACCAGATTTTGGGTGGGGGAGACCTATTTACATGGGTCCTGGTGTTGTGAGAGGAGATGGTAGGGCATTCATTATGCCAGGTCCCATAGATGATGGGTCTCTTACCATAGCCATTCGTCTTCAAACTACTCATGTGGAAGCTTTTAAGGAGTACTTCTACAAGGACATCTAA 1431 0.4368 MAVTITSSYTVIPSETTPNDSVLLCESEQINAHSHSLTIYVYNSNHKPNFKTPNIIDTMRDSLGKILVHYYPLAGRLHMIRGGRLEVECNSKGVKLLEAESTKTLDEYGDFEPNDTIMELIPKVDYSEPMEELPLLLVQVTKFTCGGFCVGVAISNVIVDGIAGTLFFDSWAKLARGGTLEEGEMPILNRRVLMRSEESLNMAPRFDHPEFKPLPLVLGNTDAKVEREKETTLAMMKLTREMVEKLKKKANELMEDDASQGQKVFSSSSATYENAAVQGRRPYSRYESISAHIWRSACKARQNYHNQPTVVYIVAGTRNRLKPPLPLNYFGNATHPTVTPTCLSGDIVSKPLSYVAQKIREAIEVLTNEYLTSAFEFIGNQHNVGWLRGTLNKQGIMEAPFLGNPNLNIWSWMSNMPTYGPDFGWGRPIYMGPGVVRGDGRAFIMPGPIDDGSLTIAIRLQTTHVEAFKEYFYKDI* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01928 476 Gene3D - 220 474 IPR023213 -
Rops5g01928 476 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 470 - -
Rops5g01928 476 Pfam Transferase family 1 474 - -
Rops5g01928 476 Gene3D - 1 213 IPR023213 -
Rops5g01928 476 Coils Coil 236 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01928 Rops-Chr5 40698796 40701025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01928 1 474 Monolignol Biosynthesis Gene Families AT5G48930 34.737 1.72e-95 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01928 K13065 - gmx:100779652 634.795