Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01887 ATGGCATACAGGCTTCATCCTTCAATGCTTCTGGTTTTGGTTACAGTTTTACTTTCAACCTATCATTCAGAGCAACTGCAATCCTCATACACTCTTACCCTTCTAAGAATCAAACGCCTATTGAACTTTCCTCCTGTTTTAAGCAGCTGGAATAGCAACACAGACTTTTGCAACACAGATTCAAGAGCTTCTCTTACTGTTGTATGCTATGAGGGCAACATAACCCAGTTGCACATAGTTGGTGAAACAAGAGCTCTACTTCTTCCAAGAAATTTCTCAATAGATTCCTTTGTCACAACACTAGTGAGGCTTCCCAGTTTGAAAGTCCTCACATTGGTTTCTATTGGCATATGGGGTCCTTTGCCTAGTAAAATTGCTCATTTATCATCACTGGAGATAGTTAACATGAGTTCAAATTTTCTATATGGTTCCATCCCTCAGGAATTTGCATTACTGTCAAATCTCCAAACACTCATTCTTGATGATAACATGTTTGCTGGCCATCTTCCTGAATGGATGGATTCTTTCCCAGACTTAACTGTGTTAAGTTTGAAAAACAATTTGTTCAATGGTTCTCTTCCTGATTCACTGAGTAGCTTGGAGAATATGAGAATCCTTTCACTTTCTCATAATCATTTTTATGGATCAGTACCTGATTTGAGCCGTTTGACAAATCTTCAAGTGCTTGAATTGGATGATAATGCTTTTGGACCTTACTTTCCTAGGCTTGGTAACAAGTTGGTTACTATAGTACTAAGAAACAACAAGTTCAGATCTAGTATCCCTGATGAAGTGAGCTCATATTATCAGCTTGAGAGATTTGACATCTCAGAAAATACCTTTGTTGGGCCACTCCAGCTAGCACTATTATCACTTCCTTCAATTACTTATCTGAACATTTCTGGGAACAAATTAACAGGAATGCTTTTTGAGAATCTGACTTGCAATTCTGCACTTGAAGCAGTGGATTTATCCTCAAATCTTTTGACTGGGAGCTTACCAAAATGTTTAATGTCAGATTCCAATGATAGGACTGTCTTGTATGCTAGAAATTGTCTAGAGGAGACAAATCAAAATCAGCATGAAATGTCCTTTTGCCACAATGAAGCCTTTGCTGTGGGAATAGTACCTGAGAGAAAGAAGCACAAACGAGTATCTAAAACAGTTCTTTCCCTTGGGATAGTAGGTGGAACTTTTGGAGGAATGGCACTTGTTGTGTTGCTTTTCTTTATTATTAGAAGAGCAAATGCTAAAAGCAAAATGAAAAATCCTCCAACAAAATTAATATCAGAGAATGCAGCTTCTGGATACACCTCTAAGTTACTCTCTGATTCAAGGTATATACCTCAAACAATGAAGTTTGGATCAGTTGGCGTGCCACCTTATCGAACTTACTCACTGGAAGAGATTGTGGCAGCTACTAACAACTTTGACACGGCTTCTTTTATGGGTGAAGGTTCTCAAGGAAAGATGAACAGAGGTCAACTTCAGGATGGTTCGCTTGTAGCCATTAGAAGCGTAAAAATGACCAAAAGCTACAGGACTCAAGACTTTATGCATCACATAGAGCTGATATCGAAATACAGGCATCCTCATTTAGTTAGTGTTCTTGGACACTGCTTTGAATGTTCTTTAGATGATTCAAGTGTCAGCAGAATATTTATTGTCTTTGAGTACGTACCGAATGGCACACTCAAGAGCTGGATCTCAGATGGACATTATAGAAAATCCCTGACATGGACCCAACGCATAGCAGCTGCAACTGGAGTAGCAAAGGGCGTCGAATTTCTGCATACAGGGATCGTGCCTGGTGTTTATTCAAACAATCTCAAAATTACAGATGTTTTATTGGACCAGAATTTTGTTGCAAAAATCAGAAGTTATAACCTGCCTTTGTTATCTAACATGGGAAAGGTTGGGCAAGGAAATCCTTCCATTGGATTCAAAAGTCATAGTGTTAACAAAAGTGTAAAAAATGAAGTTATGTCTGATATATATGACTTTGGAGTGATACTGCTGGAACTCATTCTTGGAAGGACAATAAAGTCAAGGAATGTGGAGACTTTAAAGAATCTGTTGCAAGCAAGCATAACAGCTGATGATGAAGCTAGAAGAAGCATTATAGATCCAGCAATTCGCAAGGCATGTTTGGATCAATCATTGAAGACAATGATGGAGATTTGTGTAAGGTGTCTAGTTAAAGTACCAGCAGATAGACCCTCTATAGAGGATGTTTTATGGAATTTGCAATTCGCTTCTCAAGTCCAAAATGCATGGAGAGGGGACTCTCAAAGTAGTGATGGATCTCCCATCTCTCCTTTAGCATCTCGAAGAATGACCTTCCATTAG 2349 0.3874 MAYRLHPSMLLVLVTVLLSTYHSEQLQSSYTLTLLRIKRLLNFPPVLSSWNSNTDFCNTDSRASLTVVCYEGNITQLHIVGETRALLLPRNFSIDSFVTTLVRLPSLKVLTLVSIGIWGPLPSKIAHLSSLEIVNMSSNFLYGSIPQEFALLSNLQTLILDDNMFAGHLPEWMDSFPDLTVLSLKNNLFNGSLPDSLSSLENMRILSLSHNHFYGSVPDLSRLTNLQVLELDDNAFGPYFPRLGNKLVTIVLRNNKFRSSIPDEVSSYYQLERFDISENTFVGPLQLALLSLPSITYLNISGNKLTGMLFENLTCNSALEAVDLSSNLLTGSLPKCLMSDSNDRTVLYARNCLEETNQNQHEMSFCHNEAFAVGIVPERKKHKRVSKTVLSLGIVGGTFGGMALVVLLFFIIRRANAKSKMKNPPTKLISENAASGYTSKLLSDSRYIPQTMKFGSVGVPPYRTYSLEEIVAATNNFDTASFMGEGSQGKMNRGQLQDGSLVAIRSVKMTKSYRTQDFMHHIELISKYRHPHLVSVLGHCFECSLDDSSVSRIFIVFEYVPNGTLKSWISDGHYRKSLTWTQRIAAATGVAKGVEFLHTGIVPGVYSNNLKITDVLLDQNFVAKIRSYNLPLLSNMGKVGQGNPSIGFKSHSVNKSVKNEVMSDIYDFGVILLELILGRTIKSRNVETLKNLLQASITADDEARRSIIDPAIRKACLDQSLKTMMEICVRCLVKVPADRPSIEDVLWNLQFASQVQNAWRGDSQSSDGSPISPLASRRMTFH* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01887 782 Gene3D Ribonuclease Inhibitor 29 243 IPR032675 -
Rops5g01887 782 SUPERFAMILY Protein kinase-like (PK-like) 457 752 IPR011009 -
Rops5g01887 782 Pfam Leucine rich repeat N-terminal domain 32 58 IPR013210 -
Rops5g01887 782 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 559 - -
Rops5g01887 782 SUPERFAMILY L domain-like 32 353 - -
Rops5g01887 782 Pfam Protein tyrosine and serine/threonine kinase 482 746 IPR001245 GO:0004672|GO:0006468
Rops5g01887 782 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 245 - -
Rops5g01887 782 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 560 765 - -
Rops5g01887 782 MobiDBLite consensus disorder prediction 760 782 - -
Rops5g01887 782 Gene3D Ribonuclease Inhibitor 244 346 IPR032675 -
Rops5g01887 782 Gene3D Transferase(Phosphotransferase) domain 1 560 767 - -
Rops5g01887 782 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 93 749 - -
Rops5g01887 782 ProSiteProfiles Protein kinase domain profile. 477 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01887 782 Gene3D Phosphorylase Kinase; domain 1 444 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01887 Rops-Chr5 39904519 39911312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01887 43 776 Miscellaneous Gene Families AT3G03770 62.703 0.0 899
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Rops5g01887 PK_Tyr_Ser-Thr 6.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01887 - - gmx:100813207 1295.03