Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01885 ATGAGAGGTGACAAGGCAACACAACTTTTGGAGAGTGGTTTGGAGGTGAGGGAGTATGAACTTCCGAGGAGGAACTTCAGTGTTGAATCATTGGAAATGCTATTACTGCCTATAGCGAAAGATGGGGTAGAACCCCTAGGGTCAATGGGAAATGATACTCCATTAGCTGAAAAAGTTACTTTTGAGTACTTCAAGCAAATGTTTGCTCAAGTGACAAACCCCCCTATTGATCCTATTCGAGAGAAAATAGTCACTTCTATGGAATGTATGGTTGGTCCAGAAGGTGATCTGACAGAAACCACTGAGGAACAATGCCGCCGCCTTTCACTAAAAGGTCCCCTTTTATCCATTGAAGAAATGGAAGCCATTAAAAAAATGGATTATCGGGGATGGCGGAGCAAAGTTATATACATAACTTACTCAAAGGAACATGGTAAAAGAGGATTGGAGGAAGCCTTGGACAGGATATGCGCAGAAGCACATGATGCAATTAATGAAGGCTACACCACCCTTATGCTTTCTGATAGAGCCTTCTCAAGGAAACGTGTTGCTGTGAGCTCCCTCCTGGCTGTTGGTGCAGTCCATCAACATCTAGTTAAAACACTTGAGCGCACTAGAGTTGCCTTAATGGTTGAAACTGCCGAGCCACATGAAGTGCACCATTTCTGCACCCTTGTTGGTTTTGGTGTCGATGCTATATGCCCATATTTGGCTATAGAGGCAATTTAG 729 0.4376 MRGDKATQLLESGLEVREYELPRRNFSVESLEMLLLPIAKDGVEPLGSMGNDTPLAEKVTFEYFKQMFAQVTNPPIDPIREKIVTSMECMVGPEGDLTETTEEQCRRLSLKGPLLSIEEMEAIKKMDYRGWRSKVIYITYSKEHGKRGLEEALDRICAEAHDAINEGYTTLMLSDRAFSRKRVAVSSLLAVGAVHQHLVKTLERTRVALMVETAEPHEVHHFCTLVGFGVDAICPYLAIEAI* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01885 242 Coils Coil 146 166 - -
Rops5g01885 242 SUPERFAMILY FMN-linked oxidoreductases 24 241 - -
Rops5g01885 242 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 37 231 - -
Rops5g01885 242 Pfam Glutamate synthase central domain 25 242 IPR006982 GO:0006807|GO:0015930
Rops5g01885 242 Gene3D Aldolase class I 12 242 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01885 Rops-Chr5 39864294 39865444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01885 1 27 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 77.778 9.85e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01885 K00264 - lja:Lj0g3v0129059.1 386.726