Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01883 ATGTCCAACATTGCCATTTACAAGGCATTATACAAGAGCTTTGGAGGATTTGCTGCAGATGTTGTTGCAGCTATTGACCAGCTTGTCAATAGGCGTCCTCCAGGTGTTGCAACTTTCTTCAATCCAATAGACATGGCATTGCTGTCAGCTGTAAAGGCTGGTATTTTTGTCGTGCAAGCTGCAGGAAATACTGGAACATCACCAATGAGCATGTCCTCCTTCAGTCCATGGATCTATACTGTTGGTGCCGCCTCTCATGACCGGGTTTATAGCGACTCCATATTTCTTGGAAATAATGTGACCATACCTGGAGTTGGACTTGCACATGCAGTTTCAAAGAAAGTTTTTAAATTTCGGGCCATTGCCACTATCTGTGGTGGACTAAAAGCAAACTATGGTAATGCTGCCCCAAAGGTTATGTATTACTCGGCCAGAGGACCAGATCCAGAGGACAATCTTCTTCATGAAGCTGACATTTTGAAACCGAACTTGTTAGCTCCTGGAAATTTTATTTGGGCTGCTTGGAGTTCTCTTGGCACTGATTCTGTCGAATTTCTAGGTGAGAATTTTGCAATGATGTCTGGCACAAGTATGGCTGCACCACATGTTGCTGGTCTTGCTGCGCTAATTAGGCAAAAGTTCCCCAATTTCAGTCCCTTAGCCATTGGATCTGCACTTTCTACTACTGCTACTCTGTATGACAAGAGTGGTGGTCCAATAATGGCTCAACGATCATATGCCTCTCCAGAACTAAACAAATCTCCCGCAACTCCTTTTGACATGGGAAATGGTTTCGTGAATGCAACCGCTGCATTGAATCCAGGCTTGATTTTTGATTCCAGTTATGATGATTACATGTCATTTCTATGTGGTATCAATGGTTCAGCTCCTGTGGTGCTAAACTACACTGGTCTAAGTTGTGCGCTTTATAATTCTACTATATATGGCCCTGATCTGAACTTGCCCTCAATCACTATATCAAAGCTAAACCAATCTAGAGTAGTGCAGAGGACAGTCCAAAACATTGCAGGAAATGAAACTTACAATGTTGGTTGGAATGCTCCTTTTGGAGTTTCAGTGAAAGTATCTCCAAGTCACTTTTCTATTGCCAATGGTGAGAGACAAGTCTTGTCTGTTCTCTTGAATGCAACCATCAACAGCTTTGTTGCCAGCTTTGGGAGGATTGGGCTGTTTGGAGCTGTTGTGGGTGGAGCTTTTCTCTCTGCTTTTCTTGATGTTGTTTTTGATAGGCTCTCCTCACCTGAGGTTGTCAACTTGATCCGAGGCAAGAAGCTTGACCACAAGCTGCTTCAAAGGTTGAAGACTACTCTTTATGCAGTTCAGGCTGTGCTCAATGATGCTGAGCGTAAACAGATCAATGATCCTGCGGTGAAGAAATGGCTTGATGATCTTAAAGATGCTGTCTATGTGGCTGATGACAGGTTGGACAAAGTTTCTACTGAAGCTGCCATTCAAAAGGAGGTAAGTAACTTCTTGTCTCGATTTTTCAATTTGCGAGATAGGAAGGTGCTAAAGAAGATTGAAGACATCACTAGCAGGCTAGAATATATTGTGCAATACAAAGATATTCTTGGTCTAAAAGAGATTGCCAGTGAATTGATCCATTTGCGTTACTTGGATATCTCAAGAACAGGTATCAAGACATTGCCAGAATCATTGAGTAACTTATACAATCTACAGACATTGAAGCTGTCTGGTTGTAAAAGGCTGACTATGCTGCCAAGTGGCATGCAAAATCTTGTGAACCTGCGACATCTTAATATTAGAGGAACTTATTTGAAAGAGATGCCTCCAGGAATGAGCAAATTAAAAGATTTGCAGCTTTTAACTGACTTTGTTGTGGGAGAGCATGAAGAAAATGGGATCAAGGAATTAGGAGAGCTTTCAAATCTTTATGAATCATTACGAATTAGCAAATTGGAGAATGTTACCAATAGTGGTGAAGCAGGGGAGGCACAAATAATGGATAAAACCCACATTGAAGATTTGATGTTGGAATGGTCTTCGGGTGTTGATATGCTTACAACCTCGACCCACACTGAGAGAGAAATATTGAACAAGTTACTATCTCACAAAAGCCTGAAAATTCTAAGAATCAAGAGGTACAGGAGTACAAGATTTCCAGATTGGGTCGGACATTCTTCCTGCCACAATATGACTTATATAAGTCTTGAGTCTTGTAGCAATTGTTGTTTGCTTCCATCACTTGGACAACTACCTTCTCTCAAGATCTTGGAGATTAAAGATTTTAATGGGGTGGAGACAATTGGTGTCGAGTTTTACAAGAATGATAATGATCATTGTCCTTTGAGAATACCATTTCCATCCTTGGAGAATCTGTCATTTTGTAAAATGCCATTATGGAAGGATATCAAAGTGGCTAAGTTGCCTGTTGCTTCTGCTGGAAATGTCAAGCTTGCTGGCTTAGCTTCGGCAAACCATGCTGTTGGAAAAGCTCTCTTCAAGTGTAGAAGGTCATCTTAA 2505 0.4136 MSNIAIYKALYKSFGGFAADVVAAIDQLVNRRPPGVATFFNPIDMALLSAVKAGIFVVQAAGNTGTSPMSMSSFSPWIYTVGAASHDRVYSDSIFLGNNVTIPGVGLAHAVSKKVFKFRAIATICGGLKANYGNAAPKVMYYSARGPDPEDNLLHEADILKPNLLAPGNFIWAAWSSLGTDSVEFLGENFAMMSGTSMAAPHVAGLAALIRQKFPNFSPLAIGSALSTTATLYDKSGGPIMAQRSYASPELNKSPATPFDMGNGFVNATAALNPGLIFDSSYDDYMSFLCGINGSAPVVLNYTGLSCALYNSTIYGPDLNLPSITISKLNQSRVVQRTVQNIAGNETYNVGWNAPFGVSVKVSPSHFSIANGERQVLSVLLNATINSFVASFGRIGLFGAVVGGAFLSAFLDVVFDRLSSPEVVNLIRGKKLDHKLLQRLKTTLYAVQAVLNDAERKQINDPAVKKWLDDLKDAVYVADDRLDKVSTEAAIQKEVSNFLSRFFNLRDRKVLKKIEDITSRLEYIVQYKDILGLKEIASELIHLRYLDISRTGIKTLPESLSNLYNLQTLKLSGCKRLTMLPSGMQNLVNLRHLNIRGTYLKEMPPGMSKLKDLQLLTDFVVGEHEENGIKELGELSNLYESLRISKLENVTNSGEAGEAQIMDKTHIEDLMLEWSSGVDMLTTSTHTEREILNKLLSHKSLKILRIKRYRSTRFPDWVGHSSCHNMTYISLESCSNCCLLPSLGQLPSLKILEIKDFNGVETIGVEFYKNDNDHCPLRIPFPSLENLSFCKMPLWKDIKVAKLPVASAGNVKLAGLASANHAVGKALFKCRRSS* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01883 834 Gene3D Peptidase S8/S53 domain 133 285 IPR036852 GO:0004252|GO:0006508
Rops5g01883 834 Gene3D Peptidase S8/S53 domain 2 86 IPR036852 GO:0004252|GO:0006508
Rops5g01883 834 ProSiteProfiles Serine proteases, subtilase domain profile. 1 272 - -
Rops5g01883 834 Gene3D Ribonuclease Inhibitor 519 820 IPR032675 -
Rops5g01883 834 ProSitePatterns Serine proteases, subtilase family, serine active site. 195 205 IPR023828 -
Rops5g01883 834 Coils Coil 437 457 - -
Rops5g01883 834 Gene3D - 87 111 - -
Rops5g01883 834 SUPERFAMILY L domain-like 518 792 - -
Rops5g01883 834 Gene3D - 289 397 - -
Rops5g01883 834 SUPERFAMILY Subtilisin-like 3 276 IPR036852 GO:0004252|GO:0006508
Rops5g01883 834 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 104 IPR045051 -
Rops5g01883 834 Pfam Rx N-terminal domain 406 494 IPR041118 -
Rops5g01883 834 Pfam Fibronectin type-III domain 318 384 IPR041469 -
Rops5g01883 834 Pfam Subtilase family 39 234 IPR000209 GO:0006508|GO:0008236
Rops5g01883 834 Gene3D - 414 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01883 Rops-Chr5 39810186 39828744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01883 110 399 Subtilisin-like Serine Gene Family AT4G20430 66.897 2.24e-129 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01883 - - gmx:100796456 515.768