Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01875 ATGGCATCTTTCATCTCCTACTTCAAACTTCAACCCAGAAAACTCAATCTTCCCCTCAACATATCATTCTTGTTTATACTCTTTTTTTTCCTCAAAGCCTACCCCTCCAGTTCTAATTTTCATGCCTCCACAACCACCTTCAACCATGCTAGAATGCTCAATGACATTAGAGTTGATGCCTGCACTGACCTTCACAAGTACTCAGATTATAGCTCTAAGTGCTTATATGTTAAAACACATTCTGACTGCAGGTCAAAAGGGTATATAAACTATCTTCAAATCTTTTACTGCAATCTTGGCCATTCACCAATATTAGGTCATGTGCTGCTTGTGCTGTGGCTTGTGGTGTTGTTCTATCTTTTGGCTGACACAGCTTCAAATTACTTTTGCACCTCCTTAGAAGGTTTGTCTGATATCATGAAATTATCTCCAACCATAGCTGGAGTAACTTTGCTTTCTTTGGGAAATGGTGCTCCTGATTTCTTTGCTAGTGTTGTTTCCTTCACAAGTTCCAATAATGGAGCTGTTGGCCTCAATAGCATCCTGGGGGGTGCTTTTTTTGTCTCCACTGCTGTCTTGGGGATCATAAGTTTTCTAGTCAAACCAAATGAAATTGCAGTTGATAAGGCCAGTTTCATAAGAGATGTCATTTTCTTCCTTTTCACTCTGTTGATCCTCCTTGTCATCATTTCTATTGGTAAAATTAGCTTGTTGGGTTCAATCTGTTATGTTTCTATCTACTTCCTTTATGTCTGTGCTGTCTCTGCTACCCATTTCATCTATGGAGGGGACAGGAAAGAAGAAGAATCTACATCATCTTCTGATGACTTAGTAGAGTCTGGCATACCCTTGCTGGGTTATGTAGATGATGGGAAACCAACTTTAGCAAATCAAGTGGGTAGTGTTGAAGATAAGGAGGAAAAGCAAGAGGGTTTTGATAATAACTCATTTGATTGTACTTACTTAAGCAAGTTTCTACAAGTACTGGAATTACCTCTTTGTTTGCCAAGAAGACTCACTATACCACTTGTGAGTGAGGAGAAGTGGTCAAAGCCATATGCTGTTATATCTGTCACATTAGCACCAGTTTTGTTTGCAGCTCTTTGTAATACCCAGATGGAAAATGGGAGTTCAAAGAGTAGTCTAGTTGCATATTTGACAGCTGCTTTAATTGGCATTGTTTTGGGGAATATGGCATGTGTGACCACTAAGAGTACTAGCCCACCAAGAACATGCTTGTTTCCTTGGCTAGCAGGGGGCTTTTCTATGAGTGTAACATGGACTTATATTATTGCTGAGGAACTAGTTTCTCTCTTGGTTTCTTTTGGAAATATCATAGGGGTAAGTCCTTCAATCCTTGGATTAACTGTCCTAGCTTGGGGTAATTCTCTAGGGGATTTGATAGCCAATGGTGCAATGGCCAAGAATGGTGGAGCAGATGGGGCCCAAATAGCTATCTCTGGTTGTTATGCAGGTCCTATGTTTAATACTTTGATGGGTTTGGGCTTGCCTCTTGCTCTCTCAGCTTGGTCTGAATATCCTGACTCTTATGTCATTCCCAAGGACCATTCCCTTTTAGGAACACTTTTGTTCTTGATGGGAGGGGTGCTTTGGGCCCTTGTGATTTTGATGAAGAAGAATATGAGGCTTGATAAGTCCTTGGGGGTTGGGCTCTTGACCATTTACCTCTGCTTTTTGTTTTTAAGGCTAGCCATGGCAATTGGTGTTATTAAATTCTAG 1740 0.4063 MASFISYFKLQPRKLNLPLNISFLFILFFFLKAYPSSSNFHASTTTFNHARMLNDIRVDACTDLHKYSDYSSKCLYVKTHSDCRSKGYINYLQIFYCNLGHSPILGHVLLVLWLVVLFYLLADTASNYFCTSLEGLSDIMKLSPTIAGVTLLSLGNGAPDFFASVVSFTSSNNGAVGLNSILGGAFFVSTAVLGIISFLVKPNEIAVDKASFIRDVIFFLFTLLILLVIISIGKISLLGSICYVSIYFLYVCAVSATHFIYGGDRKEEESTSSSDDLVESGIPLLGYVDDGKPTLANQVGSVEDKEEKQEGFDNNSFDCTYLSKFLQVLELPLCLPRRLTIPLVSEEKWSKPYAVISVTLAPVLFAALCNTQMENGSSKSSLVAYLTAALIGIVLGNMACVTTKSTSPPRTCLFPWLAGGFSMSVTWTYIIAEELVSLLVSFGNIIGVSPSILGLTVLAWGNSLGDLIANGAMAKNGGADGAQIAISGCYAGPMFNTLMGLGLPLALSAWSEYPDSYVIPKDHSLLGTLLFLMGGVLWALVILMKKNMRLDKSLGVGLLTIYLCFLFLRLAMAIGVIKF* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01875 579 Pfam Sodium/calcium exchanger protein 417 570 IPR004837 GO:0016020|GO:0055085
Rops5g01875 579 Pfam Sodium/calcium exchanger protein 111 253 IPR004837 GO:0016020|GO:0055085
Rops5g01875 579 Gene3D - 354 571 IPR044880 -
Rops5g01875 579 Gene3D - 142 272 IPR044880 -
Rops5g01875 579 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 21 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01875 Rops-Chr5 39527872 39529884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01875 59 577 Antiporters AT5G17860 53.269 2.39e-180 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01875 K13754 - gmx:100818583 890.182