Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01874 ATGGCTATGACAGTTTCTGTGTCCAAAAGCATGGGTTACACCTTGTTCTTGAACACCTCTTTCCTCCTTGTGATTTGTGTTTTCATGATTATTCACTTCCACACTCCTGAAGAATTTGTTGTGGTTGTGAGAAACCACTTTACCTCTGATGATGGAAGTGGTGAAGAAGACTGCAAGAACTTAGACAGCATAGGTGACTACAAAGCCAAGTGCTTGTACTTGAAATCCCATGACCCATGTGCCTCTCAGGGTTACATTGATTACCTTTACCTTTTCAATTGTAAATTTGGGAGATTCCCTTTATTGGGTTACAGTCTTCTGTTTCTTTGGCTCCTTGTTCTGTTTTATTTGTTGGCTAATACAACTTCTGAATATTTTTGTTATTCACTTGAAAACTTGTCCAAATTGCTAAGATTGTCCCCTACAATTGCTGGTGTCACCCTTCTCTCTCTTGGCAATGGTGCCCCTGATGTTTTCTCCAGCCTTGTCTCTTTCCAGGGAAGTGGGACCCGCGACGTTGGCTTTAACACTGTGATTGGGGGTGTTTCTTTTGTGTCATGTGTTGTGGTTGGGATAGTGAGTATTGCAATACGTCAAAGGGGGATTCAAGTTATAAAGTCTGCTTTTGTAAGAGATGTTTGTTTTCTCCTTTTGGTTCTGCTGTGCTTGTTTTGTATTTTGATCACTGGTGAGATCAATGTTTTTGGAGCAATTGGTTTTACTTTGATGTATGCGGTGTATGTGATTGTTGTTTATGTCTCTTCTACCCGATGGAAGGATGGGGTTGTTGATGATGCTGAAAGGGGTGGTATTTCAAGTTATGTCAATGACTTGAGTTTGAATGTTCCTCTTCTCAGTGATATGAAGAAAGGATCAATTGATTGTGTTGAAAATGGTACTCAAGAATATGACCTGAACATCGAGAAAAAGTGCTGCTGCATGAGATCTTCAATATGTGGAATGTCACTTTATGTTCTTGAGATGCCCCTTTACTTGCCTAGGAGATTGACAATTCCTGTTGTTTGTGAAGAAAGATGGTCAAAGGTGTATGCAGTTTCTTCAGTGATATTAGCACCACTTCTCTTGTCTGTCCTGTGGAGCCCTCCTCATAAAGAAAACAGTTTCTTCAGCACAAACCTTATTGTTTATGGAATTGGATCCTTGGTTGGAATTGTATTAGGAATAGCAGCATTTTTCACAACTGAAACATCAATGCCACCAAAGAAGTGCTTATTTCCTTGGCTTGCAGGAGGGTTTGTGATGAGTGTGGTTTGGAGCTACATCATAGCTCAAGAGTTGGTGGGATTGTTGGTTTCAATTGGCTACATATGTGGAATAAATCCTTCAATACTAGGGTTAACAGTTCTTGCCTGGGGGAACTCACTAGGGGATTTGATGACAAACTTAACTATGGCTTTAAATAGTGGAGCAGAGGGTGCTCAAATAGCAATATCAGGCTGCTATGCTGGTCCTATCTTCAATACTCTCATTGGATTGGGTTTGTCTCTTATAACTTCTACATGGTCAGAATATCCACAACCTATTGTGATCCCTAGAGATCCATATCTCTGGGAGACATTGGGATTTTTGGTGGCTGGATTAGTTTGGGCACTTGTGGTTTTGACAAGAAGAGATATGAAGCTTGATGGACTCTTAGGAGGAGGGCTTTTAGTTGTTTACTTCATTTCTCTGTTTCTGAGGCTGATTCAGACACAAGGGTCTCTCCAATTTTATGATTAG 1740 0.4052 MAMTVSVSKSMGYTLFLNTSFLLVICVFMIIHFHTPEEFVVVVRNHFTSDDGSGEEDCKNLDSIGDYKAKCLYLKSHDPCASQGYIDYLYLFNCKFGRFPLLGYSLLFLWLLVLFYLLANTTSEYFCYSLENLSKLLRLSPTIAGVTLLSLGNGAPDVFSSLVSFQGSGTRDVGFNTVIGGVSFVSCVVVGIVSIAIRQRGIQVIKSAFVRDVCFLLLVLLCLFCILITGEINVFGAIGFTLMYAVYVIVVYVSSTRWKDGVVDDAERGGISSYVNDLSLNVPLLSDMKKGSIDCVENGTQEYDLNIEKKCCCMRSSICGMSLYVLEMPLYLPRRLTIPVVCEERWSKVYAVSSVILAPLLLSVLWSPPHKENSFFSTNLIVYGIGSLVGIVLGIAAFFTTETSMPPKKCLFPWLAGGFVMSVVWSYIIAQELVGLLVSIGYICGINPSILGLTVLAWGNSLGDLMTNLTMALNSGAEGAQIAISGCYAGPIFNTLIGLGLSLITSTWSEYPQPIVIPRDPYLWETLGFLVAGLVWALVVLTRRDMKLDGLLGGGLLVVYFISLFLRLIQTQGSLQFYD* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01874 579 Gene3D - 139 280 IPR044880 -
Rops5g01874 579 Gene3D - 349 568 IPR044880 -
Rops5g01874 579 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 17 575 - -
Rops5g01874 579 Pfam Sodium/calcium exchanger protein 415 567 IPR004837 GO:0016020|GO:0055085
Rops5g01874 579 Pfam Sodium/calcium exchanger protein 108 252 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01874 Rops-Chr5 39521549 39523859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01874 16 576 Antiporters AT5G17850 53.439 3.52e-171 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01874 K13754 - gmx:100813848 819.305