Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01864 ATGAAGATCATCAGAATCCTAATCTTCTTCTTCTTCTTCTTCTCTATCCTTCCCTTTACATTGGCTGACGTAAGCGTTGGCTTCTATAGCTCTAGCTGTCCAAATGCAGAGGCCATCGTACGTGAGGTTGTGCAAAGGCGTTTCAACCTGGATAGATCCATTGTTGCAGCCTTGCTTCGCATGCACTTTCATGATTGCTTTGTCGAAGGTTGTGACGCCTCCATACTAATAGATTCCACCAGTACAAGGACATCGGAGAAGGATGCAGGGCCAAACAAAACAGTTCGCGGATTTGAGCTCATAGATGAGGCCAAGGAAATCTTAGAACAAGCTTGCCCTTCAACAGTGTCATGTGCAGATATCATAGCACTTGCCACCAGAGATGCAGTAGCACTAGCAAGAGGACCATTATACGATGTCCCCACAGGAAGAAGAGATGGACTACTATCCGATCCCTCTAAAGTGAACCTTCCTGGACCCTCTATTTCAGTGTCACAAGCTCTACAATTTTTCAACGCAAAAGGGTTGACACTTGAAGAAATGGTGACCCTTTTGGGAGCACACTCGGTAGGTTTTGCTCACTGCAGTTTCTTTAGAGATAGGCTCTCTAGTTTTAGAGGATTCCTTGATCCCACTATGGATCCTGCTTTGGATTTTATGTTGGTTCAGAGATGTGGGTCATCTTTTAGGCCAGCAAATAATGACCCTGTTGTGGTTTTGGACTTGAATACACCTTCTGCATTTGATAATCAATTTTATATTCAAATACTTCAGAGGAAAGGGATCCTTGAAATCGATCAGCAACTGGCTTTGGATCCATCTTCAAGAGGCATGGTTTTGAAATTTGCGGTAGATAATGATGGCTTTCAGGAGAGTTTTGCAAATGCTATGATAAAGATGGGAAGCATTGGTGTTTTGGTTGGTAATGAGGGTGAGATAAGAAAGAATTGCAGGGCTTTTAATTTTCCTTTGTAG 975 0.4297 MKIIRILIFFFFFFSILPFTLADVSVGFYSSSCPNAEAIVREVVQRRFNLDRSIVAALLRMHFHDCFVEGCDASILIDSTSTRTSEKDAGPNKTVRGFELIDEAKEILEQACPSTVSCADIIALATRDAVALARGPLYDVPTGRRDGLLSDPSKVNLPGPSISVSQALQFFNAKGLTLEEMVTLLGAHSVGFAHCSFFRDRLSSFRGFLDPTMDPALDFMLVQRCGSSFRPANNDPVVVLDLNTPSAFDNQFYIQILQRKGILEIDQQLALDPSSRGMVLKFAVDNDGFQESFANAMIKMGSIGVLVGNEGEIRKNCRAFNFPL* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01864 324 PANTHER - 8 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 ProSiteProfiles Plant heme peroxidase family profile. 23 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 FunFam Peroxidase 27 169 - -
Rops5g01864 324 Pfam Peroxidase 40 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 CDD secretory_peroxidase 25 320 IPR033905 GO:0004601|GO:0042744
Rops5g01864 324 Gene3D Peroxidase, domain 2 158 300 - -
Rops5g01864 324 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Rops5g01864 324 Gene3D - 27 321 - -
Rops5g01864 324 SUPERFAMILY Heme-dependent peroxidases 24 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Rops5g01864 324 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01864 324 FunFam Peroxidase 158 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01864 Rops-Chr5 39177439 39179507 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01864 6 321 Peroxidase AT4G26010 55.521 1.93e-120 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01864 K00430 - gmx:100816459 434.491