Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01863 ATGGTGATCGGTCACAGTAGTTGTTCCTTCGCGGTGATAGCTTCTTCATTTTCTGATCTTGGGATTCTGAACTCTAAACTTGGACGCCTTGCACTTTCAGCTGGTTTGGTGAGCGATGTGTTCACTTTAGTTTCAACAGGACTAGGCACTGCTATCATGAGCAGCCTCAAAACTAATTCTCATGATAAAAGCGCAAAGAAGGGACCCATATTTGCTGCCATGACTGTCTCAAAATACGTGGCTTTTCTGATCCTTGCTTTTGTCATTTCAAGTCCTGTAATGCGTTGGTTTGTGAGAAACACTCCAGAAGGTAGACCTGTGAAGAAAATATACATCTATGTAGTAATCCTGATGACCCTTTTAGTAGGGAGGGTAGGAACGTATTCCAACCAGAGTGTGTTAGATGGGATATTACTCCTTGGTCTTCTTGTGCCAGAAGGTCCTCCATTAGGCTCTGAATTGATTAAGCAATTTGAGTTGTTCTCCAATTGGTTCCTTTTACCACTCTTTGTCACTTGTTGTGCCATGAAGGTGGATTTTTCTGCATCCATTCATCTGTATTTGATTGCTGCTGTGGTACCCTCCATCACTGTCGTCCATTTGCTTAACATTACATTTGTTGTTTTCAAGGAATCTTCGGAAACATGA 648 0.4198 MVIGHSSCSFAVIASSFSDLGILNSKLGRLALSAGLVSDVFTLVSTGLGTAIMSSLKTNSHDKSAKKGPIFAAMTVSKYVAFLILAFVISSPVMRWFVRNTPEGRPVKKIYIYVVILMTLLVGRVGTYSNQSVLDGILLLGLLVPEGPPLGSELIKQFELFSNWFLLPLFVTCCAMKVDFSASIHLYLIAAVVPSITVVHLLNITFVVFKESSET* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01863 215 Pfam Sodium/hydrogen exchanger family 6 206 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Rops5g01863 215 Gene3D - 1 213 IPR038770 -
Rops5g01863 215 PANTHER CATION/H + ANTIPORTER 1 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01863 Rops-Chr5 39167576 39169090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01863 9 208 Antiporter Super Family AT3G44900 34.123 4.23e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01863 K26731 - gmx:100778180 234.572