Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01862 ATGAAGATCACCATCCTAATTTTCTTCTTCTTCTTCTCTATCCTTCCATTAGCATTTGCTGACTTAACAGTTGGCTTCTATGCCTTAAGCTGTCCAATGGCAGAGCCAATTGTAACTGACGTCGTTCGAAGGTATTTCCTTCAGGACGTATCCATTACCGGGGGCTTGCTTCGCTTGCACTTTCATGATTGCTTTGTTAGAGGTTGTGACGCCTCTATACTAATTGATCCAGTAAACAACAGGACAACGGAGAAAAACGCAGGACCGAACAAAACAGTTCGTGGATATGAGATCATAGATGAGGCCAAGAGAATCTTAGAACAAAATTGTCCTTTAACAGTTTCATGTGCAGATATCATAACACTTGCCACCAGAGATGCTGTGGCTCTTGCTGGAGGACCCTTATACGTTGTCCCTACAGGAAGAAGAGATGGACTAGTATCCAATCCCTTTGAAGTGAACCTTCCTGGACCACAACTCAATGTCTCTGAAACTCTACGATTCTTCACTGCAAGAGGGTTCACACTAAATGAAATGGTGACCCTTTTGGGAGCACACACTGTTGGTTTTGCTCACTGCAGTTTCTTTCGTGATAGGTTAAGAAGACGTGATCCTACAATGGATCCTGCTTTCCGTGTTGCTTTGGAACGGTTTTGTGAGTCAAGCTTTGATCCCACTGTGTTTTTGGATCAAGGCACACATTTTATATTTGACAATCAATTTTACAACCAAATACTTCAGAGGAGGGGTGTGCTTAACATTGATCAGCAACTGGCTTTGGATCCATTCACAAGAGAATTAGTCTCCACTTTTGCCTTTAATGGTTTTGGTTTTCAGCAGAGCTTTGCATATGCTATGATAAAGCTGGGAACAGTTGGAGTTTTGGTTGGAAATGAGGGTTATGTAGCTATGACACCATATGTAGATCCATCATCGGATGAGATGGGGATTTATGACGAAAGAAATGATGATGACCATGAGGGTTTAGGTGAAGTTCGAGGGGACTTTGACGATGTTGTTCTTGAAGAAACTCAGGTTCCATATATTATGGAGCCCAATCCTTCACTTAACAATCCAAAAAAGAGGAAGAGAGGAGAACAGATGTGA 1107 0.421 MKITILIFFFFFSILPLAFADLTVGFYALSCPMAEPIVTDVVRRYFLQDVSITGGLLRLHFHDCFVRGCDASILIDPVNNRTTEKNAGPNKTVRGYEIIDEAKRILEQNCPLTVSCADIITLATRDAVALAGGPLYVVPTGRRDGLVSNPFEVNLPGPQLNVSETLRFFTARGFTLNEMVTLLGAHTVGFAHCSFFRDRLRRRDPTMDPAFRVALERFCESSFDPTVFLDQGTHFIFDNQFYNQILQRRGVLNIDQQLALDPFTRELVSTFAFNGFGFQQSFAYAMIKLGTVGVLVGNEGYVAMTPYVDPSSDEMGIYDERNDDDHEGLGEVRGDFDDVVLEETQVPYIMEPNPSLNNPKKRKRGEQM* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01862 368 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 PRINTS Plant peroxidase signature 244 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 PRINTS Plant peroxidase signature 284 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 PRINTS Plant peroxidase signature 228 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 CDD secretory_peroxidase 22 300 IPR033905 GO:0004601|GO:0042744
Rops5g01862 368 MobiDBLite consensus disorder prediction 347 368 - -
Rops5g01862 368 PANTHER PEROXIDASE 25-RELATED 11 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Rops5g01862 368 SUPERFAMILY Heme-dependent peroxidases 21 305 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 Gene3D Peroxidase, domain 2 157 290 - -
Rops5g01862 368 ProSiteProfiles Plant heme peroxidase family profile. 21 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 Pfam Peroxidase 39 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01862 368 Gene3D - 26 302 - -
Rops5g01862 368 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Rops5g01862 368 FunFam Peroxidase 156 289 - -
Rops5g01862 368 FunFam Peroxidase 25 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01862 Rops-Chr5 39151357 39161974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01862 1 302 Peroxidase AT4G26010 55.776 3.60e-118 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01862 K00430 - qsu:112007502 387.882