Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01861 ATGGAAGATCAACAGGGGAAGTCACAGGAGCAACCCAATAGTCCAAGCCAAGTCTCAGAGAAGAGTGAACCAGTGAGATCAAGATGGGCTCCAAAACCAGAGCAAATCCTCATTCTTGAGTCCATCTTCAACAGTGGCATGGTGAACCCACCAAAAGAAGAGACTGTAAAAATAAGAAAACTTCTTGAGAAATTTGGAACCGTTGGTGATGCCAACGTTTTCTACTGGTTCCAGAACCGCCGGTCACGCTCCCGCCGCCGCCAACGGCAGATGCAGGCAACCGCACAAGGTGGCGGTGCAAATCAATTTCATCATCATCATCACAACATCAACAACAACAACAACAATAACTCTGCTGCTTCTGCTGCAACCATGGGTTTTGGTGCTTCCTCTTTCAGTGTTAATTCTTCTTCATCTTACCTCTCTGGTACCCCTTCATCATGTGGTGGTGGTGTTTTTGGTGGACAAGAAGGGTTGGGTGGTTTCTTCTCAGCCTCTACTCAAATGGGCTTCCCTGAAATTGATCATAGTTCAGCAGCTGCATCATCAGTTTTGTACCCTTCTGATGTTCCAAATTTGAACTACCATTCTGTGTTCATCAATGGGGTTGCAACAGAAGTTCCAAGGGGCCCAATGGACATCAAAACAGTGTTTGGCGAAGATGTAATGTTAGTTCATTCCTCTGGAGTTTCAGTTCCCACCAATGAGTTTGGTTTCTTGATGCAGAGCTTGCAGCATGGTGAAAGCTACTTTCTGGTTTCAAAGCAAACACAAGCATGA 780 0.4564 MEDQQGKSQEQPNSPSQVSEKSEPVRSRWAPKPEQILILESIFNSGMVNPPKEETVKIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQMQATAQGGGANQFHHHHHNINNNNNNNSAASAATMGFGASSFSVNSSSSYLSGTPSSCGGGVFGGQEGLGGFFSASTQMGFPEIDHSSAAASSVLYPSDVPNLNYHSVFINGVATEVPRGPMDIKTVFGEDVMLVHSSGVSVPTNEFGFLMQSLQHGESYFLVSKQTQA* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01861 259 SMART HOX_1 24 91 IPR001356 GO:0003677
Rops5g01861 259 Gene3D - 26 93 - -
Rops5g01861 259 FunFam WUSCHEL-related homeobox 11 26 93 - -
Rops5g01861 259 SUPERFAMILY Homeodomain-like 19 95 IPR009057 -
Rops5g01861 259 MobiDBLite consensus disorder prediction 7 23 - -
Rops5g01861 259 MobiDBLite consensus disorder prediction 81 117 - -
Rops5g01861 259 MobiDBLite consensus disorder prediction 1 29 - -
Rops5g01861 259 ProSiteProfiles 'Homeobox' domain profile. 22 87 IPR001356 GO:0003677
Rops5g01861 259 MobiDBLite consensus disorder prediction 89 117 - -
Rops5g01861 259 Pfam Homeodomain 26 86 IPR001356 GO:0003677
Rops5g01861 259 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 256 IPR044558 GO:0003700|GO:0048830
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01861 Rops-Chr5 39142407 39144472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01861 12 258 Wox Gene Family AT3G03660 53.137 8.01e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Rops5g01861 Homeodomain 9.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01861 - - aprc:113866574 292.737