Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01858 ATGCCGAACAACAAAAGAATAGCAAGTACCCCAACTGCGATTCCGATTCCGATGCCAAAATTTGATGACGATGAAGATGAATCATCGTCATCAGATGAGAACAAATCTGATGTTGGTGGAGACCATGTTGGGAAAGGAGGAGTCCAAGACCCAGAGCCAATTGTAACCGACGTCGTGCGAAGGTTTTTCCTTCATGACATATCCATTACCGGGGGATTGCTTCGCTTGCACTTTCATGATTGCTTTGTTAGAGGTTGTGACGCCTCTATACTAATAGATCCAACCATCAACAGGACATCAGAGAAAGCCGCAGTACCGAACCAAACAGTTCGTGGGTACGAGATCATTGATGAGGCCAAGAGAATCTTAGAACAACATTGTCCTTTAACAGTTACATGTGCAGATATCATAACACTTGCCACTAGAGATGCTGTGGCTCTTGCAGGAGGACCCTTATACGTTGTCCCTACTGGAAGAAGAGATGGATTTGTATCCGATCCCTCAGAAGTGAACCTTCCAGCACCACAATTCAATGTCTCTGAGGCTCTACCATTCTTCACTGCAAGAGGGTTCACACTGAATGAAATGGTCATCCTTTTGGGAGCACATACTATTGGTTTTGCTCACTGCAGTTTCTTTCGTGATAGGTTAAGAAGATGTGATCCTACAATGGATCCTGCTTTTTGTGTTGCTTTGGAACGGTTTTGTGAGTCAGGCTTTGATCCCACTGTGTTTTTGGATCAAGGCACACATTTTATATTTGACAATCAATTTTACAACCAAATACTTCAGAGGAGGGGTGTGCTTAACATTGATCAGCAACTGGCTTTGGATCCATTCACAAGAGAATTAGTCTCCACTTTTGCCTTTAATGGTTTTGGTTTTGGGCAGAGCTTTGCAAATGCTATGATAAAGCTGGGAACAGTTGGTGTTTTGGTTGGAAATGAGGGTGAGATTAGAAGGAATTGCAGGGCTTTTAATTCTCCTCTTTAG 993 0.431 MPNNKRIASTPTAIPIPMPKFDDDEDESSSSDENKSDVGGDHVGKGGVQDPEPIVTDVVRRFFLHDISITGGLLRLHFHDCFVRGCDASILIDPTINRTSEKAAVPNQTVRGYEIIDEAKRILEQHCPLTVTCADIITLATRDAVALAGGPLYVVPTGRRDGFVSDPSEVNLPAPQFNVSEALPFFTARGFTLNEMVILLGAHTIGFAHCSFFRDRLRRCDPTMDPAFCVALERFCESGFDPTVFLDQGTHFIFDNQFYNQILQRRGVLNIDQQLALDPFTRELVSTFAFNGFGFGQSFANAMIKLGTVGVLVGNEGEIRRNCRAFNSPL* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01858 330 Gene3D Peroxidase, domain 2 173 306 - -
Rops5g01858 330 PANTHER PEROXIDASE 25-RELATED 52 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 ProSiteProfiles Plant heme peroxidase family profile. 52 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Rops5g01858 330 Gene3D - 52 327 - -
Rops5g01858 330 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 MobiDBLite consensus disorder prediction 1 51 - -
Rops5g01858 330 FunFam Peroxidase 173 306 - -
Rops5g01858 330 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601
Rops5g01858 330 Pfam Peroxidase 56 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 SUPERFAMILY Heme-dependent peroxidases 49 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops5g01858 330 CDD secretory_peroxidase 52 326 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01858 Rops-Chr5 39016744 39026483 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01858 52 328 Peroxidase AT4G26010 56.475 1.97e-107 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01858 K00430 - gmx:100816459 369.777