Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01827 ATGGGACCTCATGGTGGAGCAGTCCAAGAGCCAAAGACTGCACCTTTGTCAAGGCAAGGGTCCTTGTATAATCTGACCCTTGATGAAGTGCAGAACCAGCTTGGAAATTTGGGGAAACCACTTGGGAGCATGAATCTGGATGAGTTGCTCAAGGGTGTCTGGAGTGCTGAAGCTGGTGAGGCCTCTGGATTGGATATTGGTGGTGATGCTAACAACATGCAGATTGGTTCTGGGTACTCTCTGAATCCACAAGGGAGCTTAACTTTATGTGGGGATCTTAGCAAGAAAACTGTTGATGAGGTTTGGGGAGAGATGCAAATGAAGAAGAACACTAATACTAATAGGGATAGGAAAGCCCAGGAAAGACAACCTACACTTGGTGAGATGACCCTAGAGGATTTCTTGGTGAAGGCTGGAGTGGTTAATGAATCTTTTCCCACCAAGGATGGTGCTATGTCAGGAGTTGACTCAAATGTAGATTCTCAACAAAATGTTTCACAACATGGCCATTGGATGCAATACCAGCTCACTTCAGTGCAGCATCAAAATCATCAGAATAATATGATGGGGGGTTTTGTGGCTGGCCATGCCATTCAACAGCCTTTTCAGGTTGCAGTGAATCCAGTTTTGGATGCAGCAATGTCACCGTCTTCTTTAATGGGTACATTAACAGATACACAAACTCCAGGTAGGAAAAGGGATGCCTCTGGTAATTTGGTGGAGAAACCTGTGGAGAGGAGGCAAAAGAGGATGATTAAAAATAGGGAATCTGCAGCTCGGTCACGGGCAAGAAAACAGGCTTACACACAAGAACTGGAGATTAAGATTTCACGTTTAGAAGAGGAGAATGAAAGGCTTAGAAGACTGAATGAGATAGAGAAGATGTTGCCAAGTGTGCCACCACCTGAGCCTAAGAATCAGCTTTGCAGAAAGAATTCAGCATCCTTTTGA 951 0.4479 MGPHGGAVQEPKTAPLSRQGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKGVWSAEAGEASGLDIGGDANNMQIGSGYSLNPQGSLTLCGDLSKKTVDEVWGEMQMKKNTNTNRDRKAQERQPTLGEMTLEDFLVKAGVVNESFPTKDGAMSGVDSNVDSQQNVSQHGHWMQYQLTSVQHQNHQNNMMGGFVAGHAIQQPFQVAVNPVLDAAMSPSSLMGTLTDTQTPGRKRDASGNLVEKPVERRQKRMIKNRESAARSRARKQAYTQELEIKISRLEEENERLRRLNEIEKMLPSVPPPEPKNQLCRKNSASF* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01827 316 CDD bZIP_plant_BZIP46 246 291 - -
Rops5g01827 316 SMART brlzneu 242 311 IPR004827 GO:0003700|GO:0006355
Rops5g01827 316 SUPERFAMILY Leucine zipper domain 246 290 IPR046347 GO:0003700|GO:0006355
Rops5g01827 316 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 244 288 IPR004827 GO:0003700|GO:0006355
Rops5g01827 316 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 244 296 - -
Rops5g01827 316 MobiDBLite consensus disorder prediction 221 243 - -
Rops5g01827 316 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 301 IPR043452 GO:0003700|GO:0045893
Rops5g01827 316 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 249 264 IPR004827 GO:0003700|GO:0006355
Rops5g01827 316 MobiDBLite consensus disorder prediction 295 316 - -
Rops5g01827 316 Coils Coil 262 296 - -
Rops5g01827 316 Gene3D - 244 296 - -
Rops5g01827 316 Pfam bZIP transcription factor 246 295 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01827 Rops-Chr5 38102078 38106512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01827 1 316 bZIP Transcription Factor Family AT3G56850 56.522 3.03e-105 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops5g01827 bZIP_1 4.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01827 K14432 - gmx:100170741 436.802