Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops5g01801 | ATGCAGCGGAACCAAGTTGATTTCTTCGTGGATAACAGACTTCAAGAAGGAGATGAAATATCAGATGCTCTTCTGAAAGCCATTGAAGAATCACATATTTCTTTGGTCATATTCTCCAAAGACTATGCTTCTTCAAGGTGGTGCTTGGAAGAGCTTGTGAAAATAATTGAATGCATGGACAGGAATAAACAAATTGTGATTCCTGTTTTCTACAACATAGATCCATCTGATGTAAGGCACCAAAAAGGGACTTACAAAGATGCATTGGCTAAACATGAAAGAAATGAAGGAAACCTAGACAAGGTGCCAAGTTGGAGATCTGCTTTGAGAAAAGCTGCTAATCTTTCTGGATTTGATTCATCAAACTGTCGAGATGAAGCTGAGCTTATAGAAAAAATTGCCAACAGTTTGTCGTTCAACTTGAATCTTATGGACCAAAATGGGTTAACAGACTTTGTTGGAATTGAAGAACGGATTGCAGATGTGGAGTCACTATTGCACCAAGGGTCAACAACAGATGTTCGTGTCATTGGGATTTGGGGCATGGGCGGTATCGGTAAGACAACTATTGCAGGTGCAGTATATAACCATCTTTGTTTTGAATATGAAGGATGCTGCTTTATGGCCAACATAACAGAAGAATTAGAGAAACGTGGAATGATTTATCTGAAGAATAAAATTCTCTCTACATTACTAAAGGGAAATGATCTAAATATTGACACACCTATTGGAGTTCCCCCTTATGTTAAGAGAAGGCTGGGTCGTAAGAAGGTTCTTCTTGTTCTTGATGATATCAATGATTCAGAACACCTACAAAATTTAGTTGGACCACTTTGTTTGTTTGGATCTGGTAGCAGAATCATTGTAACAACTAGAGACAAGCAAGTGCTTAGTAACAAAGTTGACAATGACAATATATATGAGGCTAAAGCATTAAGCTCTGATGAAGCTAATAAACTTTTCTATGCAAATGCCTCCAAAGAAAGTTGTCATGACAAGGAGTGGATTGAGCTATCAAAAAGGGTGATTCAATATGCTGATGGAAACCCATTAGCTTTAAAAGCGTTGCGTTCTTCTCTTTGTGGTAAAAGCAAAGAGGAATGGGCAAGCCTATTGCAGAAACTTAAGAACATGCCTCACTCCAAAATTCAAAATGTATTGAGGTTGAGTTATGATAGACTTGATCGAGCAGAGAAGGAAATATTTCTATATATTGCATGTTTTTTTAAAGGATATGAATATCAGCCAATAATATCTCTTCTTGATGCTTGTGGTTTCTCAACAAATATTGGGTTGAAAGTCCTTCAAGACAAAGCCCTTATAATTGAAGCCAAGGACTCTGTAAGGAGATCAATTATATGGATGCATGACTTGATACAAGAAATGGGTCGGGAGATTGTTCGAGAAGAATGTGTTGATTACCCTGGGCAACGCAGTAGGTTATGGGATCCTAATGATATTTGTCAAGTATTGAAAAATAACAAGGGAACTGAAACCATTAAAAGCATAACTCTGAACATCTCGAATTTGGATGAGCTGTCCTTAGATCCTCAAGTCTTTGCAAGGATGCAACAGTTAAAGTTTTTTGAAGTTACCGGAAGTTATGGCCATGAGCCAATCCTGTATTTTCCTCAGGGCCTTGAATATTTGCCAAATGACCTACGACTTTTTCGTTGGGATGGTTTTCCTTTGAAATCCTTGCCTCAGTCTTTTTGTGCAAAAAATCTTGTTGTGCTCGAGATGACTAATAGCCGAGTGGAAAAACTCTGGGATGGGATCCAGAATCTTGAAAATTTAAAGAAAATTGACCTCAGTGATTCCAAATATCTGCTAGAGATCCCAGATTTTTCAAAGGCCTCAAATCTTGAAGAAGTGATACTCTCTGGTTGCAGAAATTTGCGTAATGTTCATCCGTCTATTTTATCTCTCAACAAGCTTGTGCGATTAAACCTAGAATTTTGCAAAGAGCTTACCAGTCTTCGAGTTGTCGCCTATGCTAAGACGATGGTAAACGCCAATAGAAAGGAGATCAAAAAAGATAAAGCAAAATCATTGGCTTCAAGGGCAAACATGGTACAAACTCAAAACAAAAGGTACACTAATAAACTCAAGAATAAGACATATTACAATAAGCCAACTGTTCCAAAAATGAATAACCCCATTTTCAAAAGGACGAGTAATTACTTTGTCTGTGGGAAGCTTGGTCATCGTGCAACTCAATGTAGACATAAAAAGCAGGGAAATGGCAATCCTCTCAAGCCAAGAGCAAACTTAAGGAGAAGACATAATAGCTGTGGTCATTTCCCAAGCTTTACTCATGGAAGGTGTGAATGA | 2334 | 0.3792 | MQRNQVDFFVDNRLQEGDEISDALLKAIEESHISLVIFSKDYASSRWCLEELVKIIECMDRNKQIVIPVFYNIDPSDVRHQKGTYKDALAKHERNEGNLDKVPSWRSALRKAANLSGFDSSNCRDEAELIEKIANSLSFNLNLMDQNGLTDFVGIEERIADVESLLHQGSTTDVRVIGIWGMGGIGKTTIAGAVYNHLCFEYEGCCFMANITEELEKRGMIYLKNKILSTLLKGNDLNIDTPIGVPPYVKRRLGRKKVLLVLDDINDSEHLQNLVGPLCLFGSGSRIIVTTRDKQVLSNKVDNDNIYEAKALSSDEANKLFYANASKESCHDKEWIELSKRVIQYADGNPLALKALRSSLCGKSKEEWASLLQKLKNMPHSKIQNVLRLSYDRLDRAEKEIFLYIACFFKGYEYQPIISLLDACGFSTNIGLKVLQDKALIIEAKDSVRRSIIWMHDLIQEMGREIVREECVDYPGQRSRLWDPNDICQVLKNNKGTETIKSITLNISNLDELSLDPQVFARMQQLKFFEVTGSYGHEPILYFPQGLEYLPNDLRLFRWDGFPLKSLPQSFCAKNLVVLEMTNSRVEKLWDGIQNLENLKKIDLSDSKYLLEIPDFSKASNLEEVILSGCRNLRNVHPSILSLNKLVRLNLEFCKELTSLRVVAYAKTMVNANRKEIKKDKAKSLASRANMVQTQNKRYTNKLKNKTYYNKPTVPKMNNPIFKRTSNYFVCGKLGHRATQCRHKKQGNGNPLKPRANLRRRHNSCGHFPSFTHGRCE* | 778 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops5g01801 | 777 | Gene3D | - | 311 | 395 | IPR042197 | - | |
Rops5g01801 | 777 | SUPERFAMILY | "Winged helix" DNA-binding domain | 381 | 492 | IPR036390 | - | |
Rops5g01801 | 777 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 1 | 143 | - | - | |
Rops5g01801 | 777 | Pfam | TIR domain | 3 | 147 | IPR000157 | GO:0007165 | |
Rops5g01801 | 777 | ProSiteProfiles | TIR domain profile. | 1 | 141 | IPR000157 | GO:0007165 | |
Rops5g01801 | 777 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 12 | 670 | IPR044974 | GO:0006952 | |
Rops5g01801 | 777 | Pfam | NB-ARC domain | 159 | 394 | IPR002182 | GO:0043531 | |
Rops5g01801 | 777 | Gene3D | - | 145 | 306 | IPR027417 | - | |
Rops5g01801 | 777 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 150 | 405 | IPR027417 | - | |
Rops5g01801 | 777 | Gene3D | - | 1 | 144 | IPR035897 | - | |
Rops5g01801 | 777 | SMART | till_3 | 2 | 115 | IPR000157 | GO:0007165 | |
Rops5g01801 | 777 | PRINTS | Disease resistance protein signature | 252 | 266 | - | - | |
Rops5g01801 | 777 | PRINTS | Disease resistance protein signature | 346 | 360 | - | - | |
Rops5g01801 | 777 | PRINTS | Disease resistance protein signature | 594 | 610 | - | - | |
Rops5g01801 | 777 | PRINTS | Disease resistance protein signature | 176 | 191 | - | - | |
Rops5g01801 | 777 | Gene3D | Ribonuclease Inhibitor | 484 | 684 | IPR032675 | - | |
Rops5g01801 | 777 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 4 | 118 | IPR035897 | - | |
Rops5g01801 | 777 | SUPERFAMILY | L domain-like | 470 | 661 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops5g01801 | Rops-Chr5 | 37607871 | 37618289 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops5g01801 | 25 | 660 | WRKY Transcription Factor Family | AT4G12020 | 33.488 | 1.21e-95 | 325 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops5g01801 | - | - | ccaj:109805840 | 938.717 |