Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01782 ATGCTGCTCCGTTCATCTTTGTCTCCCCAGGTTAACAACTCCATGTCGGGATCCTGCATTAATGCATCACCGCTCAAAGATGGGAAGATCTCGGCCTTCAATTCCACCACTTCAAACCATGCTGTTCTCTCCACTTCAGCTCGGGCTGGTTCCGCTGCCAACGCGTCTTCCGCGTCTGTAGGAATCAATGAAAACGAGACTGATGATTATGACTGTGAAAGTGAGGAGGATGTTGAAGCATTGGTCAAAGAAGTTCCGACAGAGTCTGTTCCTTCTAGGAGTTCATCAAAACGAAGCAAAGCAGCCGAAGTTCATAATTGGTCTGAGAAGAGAAGGAGGAGTAGGATCAACGAAAATGAAGGCTTTGTAAAATCTAATTCTAAATTCTAG 390 0.4564 MLLRSSLSPQVNNSMSGSCINASPLKDGKISAFNSTTSNHAVLSTSARAGSAANASSASVGINENETDDYDCESEEDVEALVKEVPTESVPSRSSSKRSKAAEVHNWSEKRRRSRINENEGFVKSNSKF* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01782 129 MobiDBLite consensus disorder prediction 47 129 - -
Rops5g01782 129 MobiDBLite consensus disorder prediction 98 119 - -
Rops5g01782 129 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Rops5g01782 129 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 20 118 IPR031066 -
Rops5g01782 129 MobiDBLite consensus disorder prediction 47 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01782 Rops-Chr5 37340373 37340762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01782 65 118 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 62.500 8.21e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01782 - - adu:107487805 103.605