Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01765 ATGGCATCTGAACACCCAACCTTCTCAAGTTGGATTCTGCAAGGCTTCAAGTACGTGCTCTCCATATCTCATGTACAAGCAATCTCCACAAAACTGCCCCTGGACCATGTTGCATTTGCAACAGCGTGTACGATAACCAAGAGTTTGGCCTGCACTGATGGCAAGTTTTCCCTTGGACAGAATCGTAAATTCGTTTCCCGTTTTTACCACAACCACCCTACTTCTTCAAGCTCGACAGACTCGTCTAATGGCTCCGGTTCAATGATGCATGACAGTCCATCAGGTTGTTTCAAGCTATATGAAGAAGTTGCAGCAAGATTCAAACTACAAAATGGGACATTCCAGCTCAAATATCTAGATGATGAGAAGGAATGGGTGATGTTGGTGAATGACTCGGATTTGCAAGAGTGTTTAGAAATAATGGATGATATGGACACACGTAGTGTGAGGTTTCTTGTTCGTGATATGCCTTGTGTTTTAAGCAGCTCTGGCAGTAACAGTTGCTACTTGGGAGGCAACTCATAG 525 0.44 MASEHPTFSSWILQGFKYVLSISHVQAISTKLPLDHVAFATACTITKSLACTDGKFSLGQNRKFVSRFYHNHPTSSSSTDSSNGSGSMMHDSPSGCFKLYEEVAARFKLQNGTFQLKYLDDEKEWVMLVNDSDLQECLEIMDDMDTRSVRFLVRDMPCVLSSSGSNSCYLGGNS* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01765 174 SMART PB1_new 51 156 IPR000270 GO:0005515
Rops5g01765 174 Gene3D - 91 155 - -
Rops5g01765 174 ProSiteProfiles PB1 domain profile. 62 156 IPR000270 GO:0005515
Rops5g01765 174 PANTHER PROTEIN NLP8 92 166 IPR045012 GO:0003700
Rops5g01765 174 Pfam PB1 domain 90 155 IPR000270 GO:0005515
Rops5g01765 174 SUPERFAMILY CAD & PB1 domains 91 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01765 Rops-Chr5 36758917 36759569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01765 95 171 NLP Transcription Factor Family AT2G43500 67.532 3.77e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01765 - - gmx:100804426 158.688