Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01763 ATGAGTGTTTCCTTTCCAACACTATTTACATTTGGAATTGCTGTGCCATCAGGGCTATTCCTCCTAATCATACTCATGGGTTCAGGTTATGGGCGTCTCCTTGGCATCCTAATGGGACATCATACAAATATTGATCAAGGGTTGTTTGTAGTTCTTGGTGCAGCCTCCCTGGCTGGTTCTATGAGAATAACTGTATTACTTTGTGTGATATTCCTTGAACTAACCAACAACCTTCTACTTCTACCAATAACAATGATTGTTCTCCTCATAACCAAAACTGTTGGAGACAGTTTCAATCCAAGTATCTATGAGATCATATTTCACTTGAAAGGTCTTCCTTTCATGGATACAAACCCAGAACCATGGATGATAAATCTCTCAGTTGGAGAGCTTGTTGATGTTAAGCCATCAGTGATTAGCTTCCGTGGAGTAGAAAAGGTAGCTAACATAGTCAATGCATTGAAAAACACTACACACAATGGTTTCCTTGTCATGGATGATGGGGTAGATTCACCAACAGGAATGGCCAATGAGGTGACACAATTGCATGGACTAATTCTACGAGCACACCTCATCCAAGTGCTGAAGAAGAAGTGGTTCTTGAAAGAGAGAAGGAGAACTGAGGAATGGGAAGTGAGAGAGAAATTCACCTGGGTGGAACTTGCTGAAAGAGAAGGGAATATTGAAGATGTGGTTGTGACGAAAGAAGAAATGAAGATGTTTGTTGATTTACACCCTCTCACCAATACAACTCCTTATACAGTTCTAGAGAGCATCTCGGTGGCAAAAGCAAGGGTCCTGTTCAGACAAGTAGGACTTCAGCATATGCTTGTCGTACCAAAATATCAAGCATCTAGGGTGAGTTCATTAAGCACATTATCAATATTAGTTCCATTCAAACATTGA 906 0.4062 MSVSFPTLFTFGIAVPSGLFLLIILMGSGYGRLLGILMGHHTNIDQGLFVVLGAASLAGSMRITVLLCVIFLELTNNLLLLPITMIVLLITKTVGDSFNPSIYEIIFHLKGLPFMDTNPEPWMINLSVGELVDVKPSVISFRGVEKVANIVNALKNTTHNGFLVMDDGVDSPTGMANEVTQLHGLILRAHLIQVLKKKWFLKERRRTEEWEVREKFTWVELAEREGNIEDVVVTKEEMKMFVDLHPLTNTTPYTVLESISVAKARVLFRQVGLQHMLVVPKYQASRVSSLSTLSILVPFKH* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01763 301 SUPERFAMILY CBS-domain pair 119 281 IPR046342 -
Rops5g01763 301 Gene3D Clc chloride channel 3 117 - -
Rops5g01763 301 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 7 292 - -
Rops5g01763 301 Pfam Voltage gated chloride channel 7 95 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops5g01763 301 PRINTS Chloride channel signature 64 83 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops5g01763 301 PRINTS Chloride channel signature 102 116 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops5g01763 301 PRINTS Chloride channel signature 47 63 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops5g01763 301 PRINTS Chloride channel signature 15 35 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Rops5g01763 301 SUPERFAMILY Clc chloride channel 6 116 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01763 Rops-Chr5 36717019 36717924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01763 8 285 Ion Channels AT3G27170 73.835 4.06e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01763 K05016 - gmx:778094 471.085