Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01756 ATGTCATCTGGAGCATTTAAATTGCGTCAGAAGTATGCTTGTCATCTTGCTCAACTTGGTCAGGGAAGAAACAGTGTTGCAACACCTCATAACCATAACCCCATGGAGCTTGGCAAGGTTGGTGAAGAAAGTGACATATTCAAGATAGTGAGAATGACCATTCAACGTCAATATGTTACCATAATACTGTTCGGCTTTGGCAAAAGGGAGTGCGAGCTTCTTGCAATGCAGATGGAAAAGATGGACCTTAATGGGGATGATAAAAAGGACAACATAAAAAAATTTGGGGTGCTGTGGGTTACTATCCATTTGGGAGCACATGATACCGCAAAGCTTGTTGGTCTTCTTGAGAACTTCATTAAGAAATACGTCCAGTGTTATGGTGGTGGAAATCCGGAAACTGAGATCCTAATTACTAAGAGTCAAATGATCCAGCTGAAATGTGCTGCTTGTGGTGGTGCCTCTGAATCAAGCACATATGCACCTCTTCTATTGAGCAAGGATGCTGCCAAGACATGTTCAAACTATCGGTTATCTCCTGGAGAGAGTTAG 552 0.4239 MSSGAFKLRQKYACHLAQLGQGRNSVATPHNHNPMELGKVGEESDIFKIVRMTIQRQYVTIILFGFGKRECELLAMQMEKMDLNGDDKKDNIKKFGVLWVTIHLGAHDTAKLVGLLENFIKKYVQCYGGGNPETEILITKSQMIQLKCAACGGASESSTYAPLLLSKDAAKTCSNYRLSPGES* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01756 183 Gene3D - 6 130 IPR027417 -
Rops5g01756 183 SMART eIF2Bneu4 44 154 IPR002735 GO:0003743|GO:0006413
Rops5g01756 183 Gene3D - 131 160 - -
Rops5g01756 183 Pfam Domain found in IF2B/IF5 104 152 IPR002735 GO:0003743|GO:0006413
Rops5g01756 183 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 104 155 IPR045196 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01756 Rops-Chr5 36451273 36452370 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01756 105 152 Eukaryotic Initiation Factors Gene Family AT1G36730 89.583 9.90e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01756 K03262 K12598 aew:130752453 100.138