Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01744 ATGTTTGATGCTCACCTTCATCAAATTTGGTGTATAATGCTCCAAGCTGGTTCGATGAGATGTTTTTACCTTTATCTTCTAGTTCTATCATGGTTTTTGTTCATTCCATATACTCATGAGTTAGAAGCAGATCAGACTCAAGCCTTATTAGAGATAAGGAATTATCTGGAATACCCTTCCTCATTGCAAATTTGGGAAAATTACAATGGTGACCTTTGTACCCTTTCTTCATCTGCAAACATGAGCATTAAATGTGAAGATAATGCAGTAACTGAACTTAAAATCATGGGTGATAAACCTGTGAAGGCATCATCATGGTTCAATGGATTTGCAGTTCCAAATCAGACACTATCCGTGAATTTCTCTATTGATTCATTTTTCACCACATTGACAAGGTTGACCAGTTTAAGGGTTCTTAGCTTGGTGTCCTTGGGGCTTTGGGGGCCACTACCTGACAAGATTCACCGTTTCTCTTTGCTTGAAGTTTTGGACTTGAGCTCAAATTTCTTTTTTGGTGGTATCCCACCAAAAATATCTACCATGGTAAAGCTTCATGAACTAACACTTGATGACAATTATTTTAATACCAGTATGCCAGATTGGTTTGATTCATTGTCTAATCTGAATATCTTGAGTTTGAAGAACAACCACTTAAAGGGTTCATTCCCCTCTTCACTATGCAAAATTAAGACACTTAAAGTTATTTCCATGTCCCACAATGAGTTGTCTGGTGAATTACCTGGTCTTAGCACTCTCACTGGCCTACATGTTCTTGATTTAAGAGAAAATCATTTAGAATCTGAATTACCAGTGTTGCCCAAAGCAGTAGTCACTGCTTTGCTTAGCAATAACTCATTCTCAGGAGGGATACCAAGGGAATTTGGTGAATTGAATCAGCTTCAACATCTAGATCTGTCATCAAATTATCTCAGTAAGATACCCCCATCTACCTTGTTCTCTTTGCCAAACATCAGCTATTTGAATTTAGCAAACAATTTGCTTAGTGGGTCCCTTCCAGATAAATTTAGTTGTGGTAGCAAACTTGGGTATGTGGATATTTCTAGTAACAAGTTACATGGTGGACTTCCTTCTTGTTTGGCCAATAATACTGATGGTAGAGTTGTCAGATATGGTAGAAATTGTTTATCTGTTCATTCTCAGCCTCAGCAAAGAGGGTCTTATTGTAAAGAATCAAGTTCAGGATGGAAGAAATTCAAGGCATGGATAGTAGCTGCAGCAGTGGGTATCTTTGTTGTACTTGTTCTTGTGCTTTTTGTGTCTGGAGTTTTCTTATGTAAAAAGTATCATCTGAGAAAGACAACAACTGGGAAGGATGTGATGCTAAAGATTGTCCAAGATAACTCCACAACTGGGGTTTCATCTGAACTCCTTGCAAATGCAAGATTCATTTCTCAAACTGTGAAGCTAGGGACACAAACTACTCCAACCTGTCGACAATTTTCAATAGAAGAGTTGAGGGAAGCCACAAAAAACTTTGATTTGTCAACTTATATCGGTGAGGGCTCCATAGGAAAGCTGTATAAAGGTAAACTAGAGAATGGATCTTACGTGGTGATACGATCTTTGGCTCTGTCGAAGAAATGCTCAATTCAAAATTTTAAAGCAAAGTTGGATTTACTCTCAAAGCTTCAACATCCAAATTTGGTTACCCTTTTGGGTCATTGTATTGATGGTGGTTACCAAGACGATTCCAGCACTCACAAACTTCATCTTATATATGAGTATGTGCCAAATGGGAATTATCGTACTCATCTATCAGAATTTTCAGCAGAGAAGGCACTTAAGTGGTCTGATAGATTGGCAATTTTAATTGGAATTGCAAAGGCAGTGCATTTCTTACATACTGGTGTTATCCCTGGATGTTTTAGTAACCAACTAAAGACAAAAAATATCTTACTTGATGAGCACCGCATTCCAAAACTGAGTGACTATGGTATGTCCATCATCACAGAAGAAATTGAAAAGTTTGAGGCAAAGGGTGAGAAGCCAAAATCAAGTCAAAGGACAAAAATGGAGGATGATGTTTATAATTTCGGATTCATATTGTTTGAATCGCTTGTTGGACCCATAGCATGCGACAAAGGTGAAGCATTTTTTCTAAATGAAAAGGCATCCTTTGGCAGCCAAGATGGTAGAAGAAAGATTGTGGATCCAATAGTGTTGACCACTTGCTCTCAAGAGTCATTATCAATTGCAATATCTATAACAACCAAATGCATATCCCCAGAATCTTCTTCTCGTCCTTCTTTTGAGGATGTTCTATGGAACTTACAATATGCAGCTCAAGTCCAAGCCACAGCAGAATCAGATCAAAAATCGGATTGA 2346 0.3794 MFDAHLHQIWCIMLQAGSMRCFYLYLLVLSWFLFIPYTHELEADQTQALLEIRNYLEYPSSLQIWENYNGDLCTLSSSANMSIKCEDNAVTELKIMGDKPVKASSWFNGFAVPNQTLSVNFSIDSFFTTLTRLTSLRVLSLVSLGLWGPLPDKIHRFSLLEVLDLSSNFFFGGIPPKISTMVKLHELTLDDNYFNTSMPDWFDSLSNLNILSLKNNHLKGSFPSSLCKIKTLKVISMSHNELSGELPGLSTLTGLHVLDLRENHLESELPVLPKAVVTALLSNNSFSGGIPREFGELNQLQHLDLSSNYLSKIPPSTLFSLPNISYLNLANNLLSGSLPDKFSCGSKLGYVDISSNKLHGGLPSCLANNTDGRVVRYGRNCLSVHSQPQQRGSYCKESSSGWKKFKAWIVAAAVGIFVVLVLVLFVSGVFLCKKYHLRKTTTGKDVMLKIVQDNSTTGVSSELLANARFISQTVKLGTQTTPTCRQFSIEELREATKNFDLSTYIGEGSIGKLYKGKLENGSYVVIRSLALSKKCSIQNFKAKLDLLSKLQHPNLVTLLGHCIDGGYQDDSSTHKLHLIYEYVPNGNYRTHLSEFSAEKALKWSDRLAILIGIAKAVHFLHTGVIPGCFSNQLKTKNILLDEHRIPKLSDYGMSIITEEIEKFEAKGEKPKSSQRTKMEDDVYNFGFILFESLVGPIACDKGEAFFLNEKASFGSQDGRRKIVDPIVLTTCSQESLSIAISITTKCISPESSSRPSFEDVLWNLQYAAQVQATAESDQKSD* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01744 781 Gene3D Phosphorylase Kinase; domain 1 460 582 - -
Rops5g01744 781 Gene3D Transferase(Phosphotransferase) domain 1 583 781 - -
Rops5g01744 781 PANTHER UNNAMED PRODUCT 124 696 - -
Rops5g01744 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 583 781 - -
Rops5g01744 781 Pfam Leucine rich repeat 299 358 IPR001611 GO:0005515
Rops5g01744 781 Pfam Leucine rich repeat 183 242 IPR001611 GO:0005515
Rops5g01744 781 Gene3D Ribonuclease Inhibitor 42 276 IPR032675 -
Rops5g01744 781 ProSiteProfiles Leucine-rich repeat profile. 299 320 IPR001611 GO:0005515
Rops5g01744 781 Pfam Leucine Rich Repeat 160 177 IPR001611 GO:0005515
Rops5g01744 781 SUPERFAMILY L domain-like 84 387 - -
Rops5g01744 781 Pfam Protein tyrosine and serine/threonine kinase 501 761 IPR001245 GO:0004672|GO:0006468
Rops5g01744 781 ProSiteProfiles Protein kinase domain profile. 499 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01744 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 276 400 - -
Rops5g01744 781 SUPERFAMILY Protein kinase-like (PK-like) 479 764 IPR011009 -
Rops5g01744 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 42 274 - -
Rops5g01744 781 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 462 582 - -
Rops5g01744 781 SMART LRR_typ_2 297 320 IPR003591 -
Rops5g01744 781 SMART LRR_typ_2 205 229 IPR003591 -
Rops5g01744 781 SMART LRR_typ_2 321 344 IPR003591 -
Rops5g01744 781 SMART LRR_typ_2 181 204 IPR003591 -
Rops5g01744 781 SMART LRR_typ_2 252 275 IPR003591 -
Rops5g01744 781 Gene3D Ribonuclease Inhibitor 277 400 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01744 Rops-Chr5 36180362 36185968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01744 24 712 Miscellaneous Gene Families AT5G14210 57.389 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Rops5g01744 PK_Tyr_Ser-Thr 2.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01744 - - gmx:100799183 1213.75