Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01742 ATGAAAGCTTTCTCCTCAATTCAACCACCCCAGCATTTCCCTTGCACAAGATTTTTCTCTTCCACTACCACAAGGACTCAACTTTCTTTTCCTACAAAGGTCTTCTTTTGCCAGGAAAAATCTGGCATAGATGGGTCATTGAACATAAAACTGTTGCCTCCCACTCTGTTAGCAGCAGAAAAGGAAGAAGCCAAGGCTGTATTGACCTTGTTTTTGAAGAAACAAGGTTTGAGAAAAGCAATTGCAGCAAGAACCATCAACAAGTCAGATCTTTTTATTGATCACCTCGTCTCAAAGCTTCACTTTAAGCACAAATCTCGGTACCTTACAGGGAGAGAACTTACAACTCTTGAGATAAGGGATGCTCTTATCCCTTATCTTGAATCCCTTTTTGAAGAGCATGGAGACATTCTAGTGGATATAGTGGAAAACTATCCAAACCCACCTGATAAGGAAAAATCAGCTGTGCCAATTCCTCCTCCTAGTCCAGTGGTAGACTCTAAGAAGCTTAAAGCCGTGTCTCGAGTGAGTGAGATAGACGTAACTGATGGCAAGCTTCGCCCTCATATTGTCTATCTCATGGAGCTTGGTATGGATATTGAGCAGATTAGGAGTATTACACGACGATTCCCAGCTTTTGCCTACTATAGCTTGGAGGGTAAAGTCAAGCCAGTGGTTGAGTTTTTTCTTGAACTTGGAGTACCAAAAGAAAACATTGCTACCATTCTCACTAAAAGGCCTCAAATATGTGGAATCAGTCTATCTGAAAATCTTAAACCAACCATGAAGTTCTTAGAATCTTTGGGTGTTGACGAGAAACAATGGCCTAAGGTGATCTACCGCTTCCCGGCCCTGCTAACTTATAGCAGGCAGAAGGTGAGGGAAAGTATAGATTTTCTCCATGAATTGGGCCTTTCGGAAGAGAGCATAGGTGCCCACAAAATTTTGGACTTAGCATTGAGGCCAATCTCAAGCCTCTTGACTGAGAATTTGATTTCAAAATGGGATTTCTTTTTGACCATGGATTATCCAAAATCTGAGCTGGTCAAATTCCCTCAATATTTTGGATACAGTTTAGAACAAAGGATTAAACCAAGATATGCAATTGTGAAAAAAACTGGAGTGAGGTTACTGCTGAACCAGGTTCTTTCACTATCAGACAGCAACTTTGAGAAGGTCTTGAAAAAGAAAATGAAGAAAATGCAAGGTTAG 1212 0.4084 MKAFSSIQPPQHFPCTRFFSSTTTRTQLSFPTKVFFCQEKSGIDGSLNIKLLPPTLLAAEKEEAKAVLTLFLKKQGLRKAIAARTINKSDLFIDHLVSKLHFKHKSRYLTGRELTTLEIRDALIPYLESLFEEHGDILVDIVENYPNPPDKEKSAVPIPPPSPVVDSKKLKAVSRVSEIDVTDGKLRPHIVYLMELGMDIEQIRSITRRFPAFAYYSLEGKVKPVVEFFLELGVPKENIATILTKRPQICGISLSENLKPTMKFLESLGVDEKQWPKVIYRFPALLTYSRQKVRESIDFLHELGLSEESIGAHKILDLALRPISSLLTENLISKWDFFLTMDYPKSELVKFPQYFGYSLEQRIKPRYAIVKKTGVRLLLNQVLSLSDSNFEKVLKKKMKKMQG* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01742 403 Gene3D Transcription termination factor 3, mitochondrial 165 400 IPR038538 -
Rops5g01742 403 PANTHER CGI-12 PROTEIN-RELATED 180 310 IPR003690 GO:0003690|GO:0006355
Rops5g01742 403 SMART mt_12 167 199 IPR003690 GO:0003690|GO:0006355
Rops5g01742 403 SMART mt_12 240 271 IPR003690 GO:0003690|GO:0006355
Rops5g01742 403 SMART mt_12 276 306 IPR003690 GO:0003690|GO:0006355
Rops5g01742 403 SMART mt_12 204 235 IPR003690 GO:0003690|GO:0006355
Rops5g01742 403 SMART mt_12 345 376 IPR003690 GO:0003690|GO:0006355
Rops5g01742 403 Pfam mTERF 182 391 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops5g01742 mTERF 2.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01742 K15032 - gmx:100781900 507.679