Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01725 ATGCAACCTCGCCCACCTACACCATCTTCGCTCCCTTCAACGCTCACTGTCAGCTTCGTCCTCCCTTACGCTTCCCAGCTCTCCACCAAAGAGGATGACATGGTCATAGTACCAGCAACAACTGGGCAGATGTGTGTTCTCCCTGGGCATGTAGCAACAATTGCTGAGTTGAAACCAGGAGTCCTATCTGTACACGAGGGGAATGAAGTGAGCAAGTTTTTCTTATTGACAGTGGCTTTGCTTTCATCCATGCAAACTCGTGTGGCATGTTTGGGAGGAGGAAAAAACTGCTAA 294 0.4932 MQPRPPTPSSLPSTLTVSFVLPYASQLSTKEDDMVIVPATTGQMCVLPGHVATIAELKPGVLSVHEGNEVSKFFLLTVALLSSMQTRVACLGGGKNC* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01725 97 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 14 75 IPR036771 -
Rops5g01725 97 CDD F1-ATPase_delta 15 74 IPR001469 GO:0015986|GO:0045261|GO:0046933
Rops5g01725 97 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 11 75 IPR001469 GO:0015986|GO:0045261|GO:0046933
Rops5g01725 97 Gene3D - 9 90 IPR036771 -
Rops5g01725 97 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 15 88 IPR020546 GO:0015986
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01725 Rops-Chr5 35751772 35752065 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01725 1 75 Primary Pumps ATPases AT5G47030 72.000 5.10e-36 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01725 K02134 - jre:109017045 117.087