Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01719 ATGGTCTTTAGAGAAGGGTCGTTTCCATTAACCTCGAAAAGGAGAAGGGTCGTTTCCATTTATTCCATGGCCACAATTGCAGATATGAATGAAAGATTTGGACGAGAGATTCGTGTTTTTGAAACACTATCACTTTCTCCATCACAAAATGCTGGACCAGACAATGAAGAGGAGATTGATGATGACTTCTATGAGTTTACTGCTGGAGATTATTACAGACTTTTGGCTACTAAAAAGGAAGATAAATTCTTGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCAGCTCGTAGGTCAAGAATAACCAAAGTTGTAATTAGAGTTCGCTTCCCTGATAATCACACGTTGGAGGCTACCTTTCACCCATCAGAAACAATTCAGAGTTTAATTGATCTCCTCAATAAAGTGATTGCACAACCGGAGCAGCCATTTTATATATATACTACTCCGCCTAAGAAGCTGATCAAAGACATGTCTCAGGATTTCTATACTGCTGGATTTTGTCCTGGTTCCATTGTGTACTTTTCATACGACGTTCCAAAAGGTGATGACAGTGTGGTTGGCCATGTTTGCCCTTACCTACTTGAAGAGGTCATGTCCTTGAAAGGTTTGAATGTTGCTAATGATCAAACTCAGCCATCAGAGCCTGTAGAATCTGCAGCAGTGCCTGCTGAGGCAACACAACCTCCTGCTGCTGTTGAAGAACGTAAACCTGCTGAGAAAAAGCTTGTTAAACCAAAGTGGCTGAAAATGTGA 756 0.4127 MVFREGSFPLTSKRRRVVSIYSMATIADMNERFGREIRVFETLSLSPSQNAGPDNEEEIDDDFYEFTAGDYYRLLATKKEDKFLKTRKIREAEEAARRSRITKVVIRVRFPDNHTLEATFHPSETIQSLIDLLNKVIAQPEQPFYIYTTPPKKLIKDMSQDFYTAGFCPGSIVYFSYDVPKGDDSVVGHVCPYLLEEVMSLKGLNVANDQTQPSEPVESAAVPAEATQPPAAVEERKPAEKKLVKPKWLKM* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01719 251 Gene3D - 48 174 - -
Rops5g01719 251 ProSiteProfiles UBX domain profile. 99 175 IPR001012 GO:0005515
Rops5g01719 251 SUPERFAMILY Ubiquitin-like 76 175 IPR029071 -
Rops5g01719 251 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 6 251 IPR044232 GO:0032984|GO:0051117
Rops5g01719 251 MobiDBLite consensus disorder prediction 209 251 - -
Rops5g01719 251 CDD UBX2_UBXN9 104 177 - -
Rops5g01719 251 MobiDBLite consensus disorder prediction 234 251 - -
Rops5g01719 251 Pfam UBX domain 102 170 IPR001012 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01719 Rops-Chr5 35440130 35445290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01719 31 132 C2H2 Transcription Factor Family AT2G01650 33.962 2.28e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01719 K15627 - gmx:100818386 331.643