Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01715 ATGCAAGAAAATGAGGATCTTGGACCACAAGACCACTCAGTCGCTGGAGTCAATTCACATTCACAACAAGGCAATAGTGATCGTGATTTTATCATCCTTGAGATGGGTACAAAGTCACTTGCTAAGATGAACGAGGAGCTTAACCACATCCTTTGGAAAGAGGTGGAGAAACGCCGTCAATCCACTGATGACCCAGACGGAGGAGGAGAAGAGGATGAACAGATTCTGGTGGTGATGTCGGTAACCGACTACGACATCGTCATCGACGCGCTACCGTCGGGGATTATCAACGACCTTCACGAGATTGCGAAGCGCATGGTGGCCGGAGGTTTCGGTAAGGAGTGCTGGCACGTGTACAGCAGTTGCCGGAGGTAG 375 0.504 MQENEDLGPQDHSVAGVNSHSQQGNSDRDFIILEMGTKSLAKMNEELNHILWKEVEKRRQSTDDPDGGGEEDEQILVVMSVTDYDIVIDALPSGIINDLHEIAKRMVAGGFGKECWHVYSSCRR* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01715 124 SUPERFAMILY Cullin repeat-like 75 124 IPR016159 -
Rops5g01715 124 MobiDBLite consensus disorder prediction 14 28 - -
Rops5g01715 124 MobiDBLite consensus disorder prediction 1 28 - -
Rops5g01715 124 Gene3D Exocyst complex component Exo70 11 124 - -
Rops5g01715 124 PANTHER EXOCYST COMPLEX PROTEIN EXO70 37 124 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01715 Rops-Chr5 35381943 35382317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01715 71 124 EXO70 exocyst subunit family AT5G58430 68.519 6.84e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01715 K07195 - lja:Lj2g3v2364700.1 103.219