Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01714 ATGACAGAGAAGCTCAAGTCGTTTAACAATGGCTTTGAGGATATATGCAGGGCTCAGTCTTCTTGGGTTGTCTTTGATGAGCAATTTAGGGAAGAAATAAGAATTTCCATAAAGAAAATATTGTTGCCAGCTTATGGAAACTTCATTGCAAGGTTCAAGAGTGTTCCGGAACTTGGTAAGCAAGCTGATAAGTGTATTAAGTATGGAACGGAGGATATTGAAGCAAGACTCCACGATTTGTTTCAGGGAAGCAGCGCATCAAATGGTAGACGAAGAGTAAAGAGCTGCTAG 291 0.4055 MTEKLKSFNNGFEDICRAQSSWVVFDEQFREEIRISIKKILLPAYGNFIARFKSVPELGKQADKCIKYGTEDIEARLHDLFQGSSASNGRRRVKSC* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01714 96 Gene3D Exocyst complex component Exo70 1 85 - -
Rops5g01714 96 SUPERFAMILY Cullin repeat-like 3 81 IPR016159 -
Rops5g01714 96 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 83 IPR004140 GO:0000145|GO:0006887
Rops5g01714 96 Pfam Exo70 exocyst complex subunit 2 78 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01714 Rops-Chr5 35380715 35381005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01714 1 91 EXO70 exocyst subunit family AT5G58430 56.044 1.21e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01714 K07195 - gmx:100803694 141.739