Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01713 ATGCCATGGCAAGACCTCGAAGACGAAATTGAAAGATGTATTAAAGCTTCCAATGTCGCTCTCAAGAGACTCTTCCCTAGCGAGCGTAGACTCCGCGACCGCGTCTTCTTCGGCTTCTCCTCCGTTGCCGATTTCTCCTTCATGGAGGTTTGCAGAGGATCCACCATTCAGCTTCTCAATTTCGCCGATGCCGTCGCGGTCGGAAGCCATTCACCGGAGCGGCTGTTCAAAACCATCGACGTGTTTGAAACACTAGGTGACCTAATTCCCGAGTTTGAGTCTCTGTTTTCTCATCATCAGTACAGTGTGTTGCTCAGGAATGAAGCAATCACGATTTGGAAGAAATTGGGAGAAGCAATCAGGGGCATTTTCATGAAGTTGGAGAAGCTGATTCTCCGGGATCTGGCGACGGTTCCCGGTGGCAGGCTTCAACCGATTACACGGGACGTGATGAACTACCTCCGTGACGCTTGCCGTTCGCGGCAGACATTGGAACAAGTGTTTGAATATTATGGACATCCATCGAAGAAATACCCTAAACTTGATGATAGAGTGCCATCTTCTTCCTCTCTCTCAGGGAAAATGCATTGGATTATGGAACTATTGGAGAGTAATTTGGAAGCAAATTCCAAATATACAAGGACCCTGCTTTGCGCTATGTTTTCTTGA 669 0.4768 MPWQDLEDEIERCIKASNVALKRLFPSERRLRDRVFFGFSSVADFSFMEVCRGSTIQLLNFADAVAVGSHSPERLFKTIDVFETLGDLIPEFESLFSHHQYSVLLRNEAITIWKKLGEAIRGIFMKLEKLILRDLATVPGGRLQPITRDVMNYLRDACRSRQTLEQVFEYYGHPSKKYPKLDDRVPSSSSLSGKMHWIMELLESNLEANSKYTRTLLCAMFS* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01713 222 SUPERFAMILY Cullin repeat-like 1 216 IPR016159 -
Rops5g01713 222 Pfam Exo70 exocyst complex subunit 12 212 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops5g01713 222 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 213 IPR004140 GO:0000145|GO:0006887
Rops5g01713 222 Gene3D Exocyst complex component Exo70 1 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01713 Rops-Chr5 35380517 35382152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01713 1 221 EXO70 exocyst subunit family AT5G58430 70.222 9.94e-99 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01713 K07195 - gmx:100803694 320.857