Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01708 ATGCCGAGCGTGGGCGTTAAGCTCTATAGCGTGTTCTTCAAGTTTCTATTAAAACACCGTTTGCAGAATCGGATCCAAGCTCCACCCGGAGAATCCGACCCGTTTGGCGTGACTTCGCGACCCGACGAATCGGTCGCTGCTGCGAACCCTTCCTTCACCGACGGCGTCGCTACGAAGGATATTCACATCGACAACTTAACCTCTCTCTCGATCCGAATTTTCCTCCCAGAATCAGCACTCGCCCCACCCGAACCCGGTTCCAAACCTAACCGTTCCAAGCCTAATGCCACCAAACGAATACCCGAACCTGGAACCGAAACGACGTCGTCGCAGCACGCTTTGCGGAGAAACAGTTTCGAACCTTCCGTCGCGACACCTGTTGAAGAGGCGAGGAGGAGAAGCATCGGCGGCGGAGGGGAGGGTTTGAATTTGACCTCCGGCGGCGGATACGGTGGCTACGCGCCGACGGTGGATGATTGCCGGAGAAAACTTCCAGTGATGGTGCAGTTTCATGGTGGTGGTTGGGTGAGTGGGAGCAATGAATCGGTCGCTAATGATTTCTTTTGCCGGAGGATCGCGAAGCTTTGTGATGCGGTTGTTGTGGCCGTCGGGTACCGGCTTGCTCCGGAAAATCGGTACCCGGCGGCGTTTGAGGATGGGATGAAGGTGTTGAATTGGCTGGCGAAACAGGCGAATTTGGCAGAGTGTAGTAAGTCGTTGGGGATCAAGAGATGGGATGGTCATAAAAGGGATATTGTTGATTGTTTTGGAGCTTCCATGGTTGAGCCATGGTTGGCTGCTCATGGGAATCCATCAAGGTGTGTTCTTCTTGGCGTGAGTTGTGGTGCAAATATTGCAGACTATGTGGCTCGAAAAGCTGTAGAAGCAGGCAGACTTCTTGACCCTATCAAGGTGGTTGCACAGGTCCTGATGTATCCATTTTTCATTGGAAGTGTGCCCACTCGTTCTGAAATAAAGTTGGCAAACTCTTATTTTTATGATAAGCCTATGTGTATGCTAGCATGGAAACTATTCCTACCCGAGGAAGAATTTAGCCTTGACCATCCAGCTGCCAATCCCCTAGTCCCAGGCCAGGGTCCTCCTTTAAAGCTGATGCCTCCAACATTGACAGTTGTGGCGGAACATGATTGGATGAGGGACCGTGCCATTGCTTACTCAGAGGAGCTTAGGAAGGTGTATGTTGATGCACCTGTTCTTGAGTATAAGGATGCAGTCCATGAATTTGCAACACTTGATGTACTTCTTAAAAGCCCCCAGGCCCAGGTTTGTGCTGAGGACATTGCCATCTGGGTCAAGAAGTATATTTCACTTCGTGGTCATGAATTCTCGTATTGA 1356 0.5088 MPSVGVKLYSVFFKFLLKHRLQNRIQAPPGESDPFGVTSRPDESVAAANPSFTDGVATKDIHIDNLTSLSIRIFLPESALAPPEPGSKPNRSKPNATKRIPEPGTETTSSQHALRRNSFEPSVATPVEEARRRSIGGGGEGLNLTSGGGYGGYAPTVDDCRRKLPVMVQFHGGGWVSGSNESVANDFFCRRIAKLCDAVVVAVGYRLAPENRYPAAFEDGMKVLNWLAKQANLAECSKSLGIKRWDGHKRDIVDCFGASMVEPWLAAHGNPSRCVLLGVSCGANIADYVARKAVEAGRLLDPIKVVAQVLMYPFFIGSVPTRSEIKLANSYFYDKPMCMLAWKLFLPEEEFSLDHPAANPLVPGQGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVYVDAPVLEYKDAVHEFATLDVLLKSPQAQVCAEDIAIWVKKYISLRGHEFSY* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01708 451 Pfam alpha/beta hydrolase fold 167 416 IPR013094 GO:0016787
Rops5g01708 451 PANTHER ARYLACETAMIDE DEACETYLASE 44 416 - -
Rops5g01708 451 MobiDBLite consensus disorder prediction 79 141 - -
Rops5g01708 451 MobiDBLite consensus disorder prediction 27 50 - -
Rops5g01708 451 Gene3D alpha/beta hydrolase 37 445 IPR029058 -
Rops5g01708 451 MobiDBLite consensus disorder prediction 101 118 - -
Rops5g01708 451 SUPERFAMILY alpha/beta-Hydrolases 51 442 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01708 Rops-Chr5 35306284 35310491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01708 1 451 Carbohydrate Esterase AT5G14310 71.398 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01708 - - cave:132180842 702.59