Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01703 ATGAAATTTCTTTGTTTTCTCCGCCATGCTAAACGTGTTCAGAATGATTCACATATTCATGATACCAATTACACCATCCACAGTGAAAAATCATTCAGTTGGGGTGATTATGATGATGATATCTATGCATTCTGTCATCTTGATGAATGTGTTGGCACTCCAAAAGGGTACAAAGTAGACTGTGACATGAGGAAGAATATGATAGATTGGTTGATAGACACACACTATGGACTAGCTCTCATGCCAGAGACTCTTTATCTTTGTGTCAACATTCTTGACAGGTTTCTTTCCAAAACCAAGTTTAATGCCACAACAAAGAAGGATTTTGAACTTGTTGGTATCACCTCATTGTTGTTGGCTTCCAAGTATGTACAACATGATGCACTTTCTGTATATGAAATGGAGATCATAACCCAATATTCTTGCTCAATATATGACATTCTTCACATGGAGAATGTTATACTCCAAAAGCTTGATTGGGTTTTGACTGTTCCAACTCCTTATGTGTTTCTTCTTAGGAACATGAGAGTATGTCTCCTATCTGAGGATGATAAGATTATGGAGAACATGGTGTTTTTCATCTCTGAACTTAGTTTAACACACTACCCCATTATGGGTCATTACAGGTCTTCTATAATTGCAGCTTCTACTGTGTATTGTGCAAGAATTATTGTTGGCAGGTTCCCTTTTTGGAGCAAGAATTTGATGCATTGTACTGGGTATTCTAGGAAGAAGTTAAGTTCTTGTGCCAAGGTTATGTTTGACTTGTGCAATGCAGCTTGTAGAGATGGCAACATGGATGTTTTTTGGAAATTCTCAAGTCCAGATTATTGTAAGGTGGCATGTATTGCTCAACAAGAATTCTCCAAGAATCATTCTGATCTTAGAATACTTCTCAACATGGGCCGACATCATCTATTCAATTTAAATGTCTGTCAGAAAAACCTTGGACTAATGTTCCTATGTGGTTGTTGA 975 0.3713 MKFLCFLRHAKRVQNDSHIHDTNYTIHSEKSFSWGDYDDDIYAFCHLDECVGTPKGYKVDCDMRKNMIDWLIDTHYGLALMPETLYLCVNILDRFLSKTKFNATTKKDFELVGITSLLLASKYVQHDALSVYEMEIITQYSCSIYDILHMENVILQKLDWVLTVPTPYVFLLRNMRVCLLSEDDKIMENMVFFISELSLTHYPIMGHYRSSIIAASTVYCARIIVGRFPFWSKNLMHCTGYSRKKLSSCAKVMFDLCNAACRDGNMDVFWKFSSPDYCKVACIAQQEFSKNHSDLRILLNMGRHHLFNLNVCQKNLGLMFLCGC* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01703 324 Gene3D - 55 156 - -
Rops5g01703 324 SUPERFAMILY Cyclin-like 34 160 IPR036915 -
Rops5g01703 324 SMART Cyclin_C_2 165 286 IPR004367 -
Rops5g01703 324 Gene3D - 157 295 - -
Rops5g01703 324 Pfam Cyclin, C-terminal domain 165 284 IPR004367 -
Rops5g01703 324 Pfam Cyclin, N-terminal domain 59 162 IPR006671 -
Rops5g01703 324 PIRSF Cyclin_A_B_D_E 9 297 IPR046965 GO:0016538|GO:0044772
Rops5g01703 324 PANTHER CYCLINS 34 253 IPR039361 -
Rops5g01703 324 SUPERFAMILY Cyclin-like 164 285 IPR036915 -
Rops5g01703 324 ProSitePatterns Cyclins signature. 64 95 IPR006671 -
Rops5g01703 324 SMART cyclin_7 169 255 IPR013763 -
Rops5g01703 324 SMART cyclin_7 69 156 IPR013763 -
Rops5g01703 324 FunFam G2/mitotic-specific cyclin 53 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01703 Rops-Chr5 35261569 35262543 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01703 36 283 Core Cell Cycle Gene Families AT2G26760 37.945 5.72e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01703 K21777 - gmx:547782 201.445