Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01689 ATGGCTTCTTCTCTCACTATGAGTTCCACTTCTATCTCTCTAATTGTGCTTCTCTCGGCCATTTTCTTTGGTCCACAATGTTTCTCTATGGCTTCCCAAGAGTTCCAAGTTGGTGGCTCAAAAGGGTGGGTTGTTCCACCTCCCAATGACACCAATATCTACAATGGTTGGGCTTCCCACAACAGGTTCCATGTTGGTGACTCCATAAACTTTAAGTACAAGAAAGACTCAGTGATGGAGGTTGGTGAGGAAGATTACAAGGAGTGCAATGCTACTCATCCAACCTTCTTCTCCAACAATGGCAAGACTTTGTTCAAATTAGACCACTCAGGGACTTACTATTTCATAAGTGGTGCATCAGGGCATTGTGAGAAGGGACAGAAGATGATTGTGAGGGTGATGGTTCAAGATGAGTCTCTTCCTCAGCATGCAAAGTCTTCTGGGAACCATGGTCCAGTTTCTCCAATTGGGGTCTCTGAAATGGTCTTCCTTCAGTTTGTTTTGGCGTTTGTTGCCTCCTATGTTATTTGA 531 0.4426 MASSLTMSSTSISLIVLLSAIFFGPQCFSMASQEFQVGGSKGWVVPPPNDTNIYNGWASHNRFHVGDSINFKYKKDSVMEVGEEDYKECNATHPTFFSNNGKTLFKLDHSGTYYFISGASGHCEKGQKMIVRVMVQDESLPQHAKSSGNHGPVSPIGVSEMVFLQFVLAFVASYVI* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01689 176 Gene3D - 31 139 IPR008972 -
Rops5g01689 176 FunFam Early nodulin-like protein 1 32 138 - -
Rops5g01689 176 PANTHER BLUE COPPER PROTEIN 31 141 IPR039391 GO:0009055
Rops5g01689 176 CDD OsENODL1_like 34 134 IPR041846 -
Rops5g01689 176 ProSiteProfiles Phytocyanin domain profile. 33 135 IPR003245 GO:0009055
Rops5g01689 176 SUPERFAMILY Cupredoxins 33 134 IPR008972 -
Rops5g01689 176 Pfam Plastocyanin-like domain 52 127 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01689 Rops-Chr5 35056367 35057171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01689 7 134 Phytocyanin Superfamily AT3G18590 55.039 5.96e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01689 - - lang:109346935 254.988