Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01658 ATGAATGATGCTGGTGAGAAGGGTTCTTCTTGTTTGGCCATAACGGAGAAGAAGAAGAAGAATCAAAGGCCAGGTGGTTGTATTGGTAGTATTTTCTTTCAGCTCTTTGATTGGAACCGGAAGCTCACAAAGAAGAAGCTCTTCTCCAAGAAACTTCTACCTCCTGCTAGTGCAAAACAAGCTGCTTCTTCAAAGAAGTTTAAAGGAGATGAGAAAATGCCAAATTCCAAGTTCCACTTGATTGCTAATGAGAACAATGGAGGTTTCCCAAGTACCAAAAAAGGTGGGAATCGTGTTATAGAGGTAGAACAAAAACATGAAATGCGAGTTCCGGGTTTGGTAGTCAGGTTGATGGGTCTAGAATCTATTCCAACTTCACATGGGTCCAAGAAATCTTCCTTTTCTGATGGTGATGTGGAGAAGGAGTCTTTGGATAATTATGGTAGTGAAGCTGACAAACAAGGGGTGGATTTGGAAATGGGAGTTGCAAATGCAAAGCATGATTCAAGACCTCAGAAGCTTCAGAAAACTGGGACATATGAGAGAAAAGCAGTGACTAGGTTTGGAACTGAGGCACTGCAAATTAAGAGTGTTTTGTCACAAGTAAGAAAGTATAATCACCATCACCATCACCATCACCATCACCATCATCCTAAATTCATTTCTCCTTTGAAGAGCCCAAGAGTTTCTTCTGAAAAGAGTGCATCTCGAAGCACTAGGTTAATAGAAGCAGCTACTAAGATCTTGGAACCTGGACTGCTTGCTACAAGTAGAGCCAAACGTGCTCTTACTTCTTCTTCCAATTCCATTTATCCTCCCAATAATGGCATTATGACAGGAAGGGAGGGAACTAGGCCAGTGGACATGCAAAATCAATCTGGTTGTGATGCTAGCACAGCTAAGCCTTTGATAGGGCATACTTCTTGCAAAAATTGCGGTAATTTGCTTGATGTTGTTGTTGATTGCAAGCCAGAGTTTGAGACCAGCACACCTATTGTTTCAGATGTGTTCACTGCCTTCTCTTTGGAATCAGCACAGAAGAGAAGATCATTAATCCCCTCTCATGAAAATGATGTAGTTCTTTTGAGAAGCCAGGAGAAGATCATAACTCTTGTTGATGAAGATGGAAAAAATAATGCAGAGTCTTGTAATGAATCCACTACCAGAAGAATGTCTGTGCCTGTTAAATGGGATTCATCATGCACCCTAGAGGATGATGGAGCATCTTCTTTTGCCTGCAAACACAGAACTCAAACACAAGAAAGGGTGTTAAGCAATGAAAAAATTTCATCTGGCTCTAGAACAAGTAATATGCAAGAGAAGAGAGTATCATCAGCTGCAAGCACTGTGAGTGGGACTAAAGATTTTGTTGCTTTGAATAGAAGCCTAAGTGGTAGAACTAGGATGAGGTCTCCTACCAAGATGGATAGTTGCAAATTTGATCTTGAGAGGAAACCTTCAAATAGACAACATGATTCCTTGTCTTGCATAAGCACCTTAGAGAGAAAATGGAGGACCCCAAATGTTTCACAAGTTGAAGGTACAGCTTCTGTTAATTTGGTTAGAGTGAAACAAAGAAATGCTAGTTCTGATGCACAATGGGGTAAAAGGAGGAGTTTTGATGCTTCCTCCCCAAAAAGTTATAATGTCAAAAGTAAACGAGGTGATCAGGTAGAAACGGATAAGGTTAATGACAATAAGGTTGTTTCATTTGCCTATAGTTCCCCCTTTAAGCAAAAGATAGTAATACCAGCTGCAAAGGAAGAGAGTAGCAGTAATAATGAGATTAAGATGAATTTTCAAAGACCTCCACCCATGAGAGGAGATGCTTTAGGTGCTTTTCTACAGCAGAAGTTGAAGGAATTACGCTTTCGAGAAAATGGGGAGTTGGCTACTGATTGTCCATCTGCAAAATCAACTGCCATGATTCTTCAAGAACTGATATCTGCTCTTAATTCAGAGCATCTAACATGCTCTGATGATCATATGTTTAATGACAAGCATGAAGCAAATCATGTAGTAACTTCTTGCAATGGTAATCATCTCAGTCCTGGATCTGTTCTTGAAGCTTCCTTTTCTTCGAGTAGTATAGATGAAGGCTCAGGGCATGGTTTTCACCCTGACTCTATGAATTGCTCATATGATCAACTGGAACAAGATTCTGAGCTTTTAGATTCTGCAACATCATTTAACAAAGGGAAGATAGGTTGTGAGATACTGACTGAACTAGTCAACCAAATTCACATGATATTGCAAAGTTTAAATTCTTTTTGGACAAGATTAACTGAAAGCAAGCTCACTCATATGAAGGAAGTTATCTTCAATGCTGAATTGGTCATTGGAAATGTCACTGAGCAAAGTGAGGGTGGAGTGCCACAACTTATCATTTCTTGCTTTCTTCTTAATGAACTAAACACCATGGCAAATGATGCTATGTGGAGAGATTTTAATGGTTTTGTGGGTTGTGAGGAATCTAAAGAGAGAAGCCAACTTAAGGGATTTCTATTTGATTGTGTAATAGAATATCTAGAATCAAATTGCTGCCAACATTATAACAGTATATTCAAGTCATGGTCTGAATGGATTAAGCTTCCTTTATGCATGAAAGCTGAGATGTTGGTTCAAGAGGTCAAGAATGAGATCAAGAAGTGGACATGTATATCTGGGATGGTACCTGACCAAATCATAGAATGGGAGATGAGTCACTCCTTGGGGAAATGGACTGATTTCAGTGTTGAAGCATTTGAGGTTGGTGTTGATTTAGATGGGGATGTACTTCAAATTTTGGTTGATGAAATTGTTGAAGATCTTGTAGATTCTAGGCAGGGCACATTTGAACTTAACTAG 2847 0.3948 MNDAGEKGSSCLAITEKKKKNQRPGGCIGSIFFQLFDWNRKLTKKKLFSKKLLPPASAKQAASSKKFKGDEKMPNSKFHLIANENNGGFPSTKKGGNRVIEVEQKHEMRVPGLVVRLMGLESIPTSHGSKKSSFSDGDVEKESLDNYGSEADKQGVDLEMGVANAKHDSRPQKLQKTGTYERKAVTRFGTEALQIKSVLSQVRKYNHHHHHHHHHHHPKFISPLKSPRVSSEKSASRSTRLIEAATKILEPGLLATSRAKRALTSSSNSIYPPNNGIMTGREGTRPVDMQNQSGCDASTAKPLIGHTSCKNCGNLLDVVVDCKPEFETSTPIVSDVFTAFSLESAQKRRSLIPSHENDVVLLRSQEKIITLVDEDGKNNAESCNESTTRRMSVPVKWDSSCTLEDDGASSFACKHRTQTQERVLSNEKISSGSRTSNMQEKRVSSAASTVSGTKDFVALNRSLSGRTRMRSPTKMDSCKFDLERKPSNRQHDSLSCISTLERKWRTPNVSQVEGTASVNLVRVKQRNASSDAQWGKRRSFDASSPKSYNVKSKRGDQVETDKVNDNKVVSFAYSSPFKQKIVIPAAKEESSSNNEIKMNFQRPPPMRGDALGAFLQQKLKELRFRENGELATDCPSAKSTAMILQELISALNSEHLTCSDDHMFNDKHEANHVVTSCNGNHLSPGSVLEASFSSSSIDEGSGHGFHPDSMNCSYDQLEQDSELLDSATSFNKGKIGCEILTELVNQIHMILQSLNSFWTRLTESKLTHMKEVIFNAELVIGNVTEQSEGGVPQLIISCFLLNELNTMANDAMWRDFNGFVGCEESKERSQLKGFLFDCVIEYLESNCCQHYNSIFKSWSEWIKLPLCMKAEMLVQEVKNEIKKWTCISGMVPDQIIEWEMSHSLGKWTDFSVEAFEVGVDLDGDVLQILVDEIVEDLVDSRQGTFELN* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01658 948 MobiDBLite consensus disorder prediction 527 551 - -
Rops5g01658 948 MobiDBLite consensus disorder prediction 422 449 - -
Rops5g01658 948 MobiDBLite consensus disorder prediction 205 238 - -
Rops5g01658 948 MobiDBLite consensus disorder prediction 205 222 - -
Rops5g01658 948 Pfam Domain of unknown function (DUF4378) 791 932 IPR025486 -
Rops5g01658 948 Pfam DUF761-associated sequence motif 103 127 IPR032795 -
Rops5g01658 948 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 11 936 - -
Rops5g01658 948 MobiDBLite consensus disorder prediction 527 557 - -
Rops5g01658 948 MobiDBLite consensus disorder prediction 461 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01658 Rops-Chr5 34539638 34543936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01658 6 937 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 31.432 3.65e-85 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01658 - - aprc:113861902 1040.41