Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01641 ATGGCTATGGTGATTCTCACTACCCTTTTGGTTATCCTTGTGAGTTTGGTTTTGAAAGTTGCTTATGAAACCATCTTATGTTATTGGGTTAATCCAATACGTATCAAGAGAATCATGGAGAGGCAAGGTGTGCGTGGTCCTAAACCTCGCTTTCTTACTGGCAACATCTTGGACATGGCTTCCCTTGTTTCAAGTTCCATTTCCAAAGACATGAAAACTATCAGCCATGATATTGTTGGTCGCGTTTTGCCACATTTTGTTGCTTGGTCCAGCCAATATGGAAAGAGATTTCTATTTTGGAATGGTATAGAGCCAAGGTTGTGCCTAACAGATGCTGGAATGATCAAAGAGTTCCTGTCAAAGTACAATACCATATCTGGGAGATCCTGGCAGCAACAACAGGGGTCCAAACATTTCATTGGGTTAGGCTTGTTGATGGCAAATGGTGAGAATTGGTACCACCAACGTCACCTTGTTGCCCCTGCATTCATGGGAGACAAACTTAAGAGCTATGCTGGGCATATGGTGGAATGCACTAAGGAGATGCTTGAATCATTGCAAAATGTGTTGGAGTCTGGCCAAACTGAGGTGGAGATTGGAGAGTACTTCACTAAACTCACTGCTGATGTTATCTCTAGAACTGAGTTTGGTACAAGCTATCAAAAGGGAAAGCAAATATTTGATCTCCTCACAAAACTTCAGAGTTGTTCTGCTCAAGCAACTCGCCATCTTTGCTTTCCTGGAAGCCGGTTTTTTCCTAGTACTTATAACAAAGAGATCAAGACTTTGAAGAAGGAAGTGGAAAGACTATTGATGGAGATAGTACAAAGTAGGAAAGACTGTGTGGAGTTGGGTAGAAGCAACTCTTATGGGAATGATTTGTTGGGTATGCTCCTTGATGAGATTCAAAGGGGTGGTAGCTTGAATCTTCAACTAGTTATGGATGAATGCAAAACATTTTTCTTTGCTGGACATGAAACCACTGCACTCTTGCTCACTTGGACAGCTATGTTACTAGCTAGCAATCCATATTGGCAAGCCAAAGTGAGAGCTGAGATCAAAGAAGTCTTCAATGGTGGAACTCCTTCTGTGGATCAACTCTCCAAGCTCACTATGTTACATATGGTAATTAACGAGTCAATTAGGCTCTATCCTCCAGCAACTGTACTCCCTAGAATGGTTTTTGAAGACATTATGTTAGGTGACCTTTATATTCCAAAGGGCTTATCTATTTGGATTCCAGTTTTGGCTATTCATCATAGTGAAGAACTATGGGGTGAAGATGCAAATGAGTTCAACCCTGAAAGGTTTGCTTCAAAGTCATACATGCCTGGCCGTTTTATACCATTTGGTTCTGGCCCTAGAAATTGTGTTGGACAATCTTTTGCTATTATGGAAGCTAAGATCATATTGGCAATGTTGATCTCTAGGTTTAGCTTCACCATTTCAGAGAATTATAAGCATGCACCAGTGATTGTCCTCACAATTAAGCCTAAGTATGGTGTTCAAGTTTGTTTGAAGCCCTTAGATCCATAA 1536 0.4102 MAMVILTTLLVILVSLVLKVAYETILCYWVNPIRIKRIMERQGVRGPKPRFLTGNILDMASLVSSSISKDMKTISHDIVGRVLPHFVAWSSQYGKRFLFWNGIEPRLCLTDAGMIKEFLSKYNTISGRSWQQQQGSKHFIGLGLLMANGENWYHQRHLVAPAFMGDKLKSYAGHMVECTKEMLESLQNVLESGQTEVEIGEYFTKLTADVISRTEFGTSYQKGKQIFDLLTKLQSCSAQATRHLCFPGSRFFPSTYNKEIKTLKKEVERLLMEIVQSRKDCVELGRSNSYGNDLLGMLLDEIQRGGSLNLQLVMDECKTFFFAGHETTALLLTWTAMLLASNPYWQAKVRAEIKEVFNGGTPSVDQLSKLTMLHMVINESIRLYPPATVLPRMVFEDIMLGDLYIPKGLSIWIPVLAIHHSEELWGEDANEFNPERFASKSYMPGRFIPFGSGPRNCVGQSFAIMEAKIILAMLISRFSFTISENYKHAPVIVLTIKPKYGVQVCLKPLDP* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01641 511 Coils Coil 260 280 - -
Rops5g01641 511 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01641 511 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01641 511 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01641 511 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01641 511 Gene3D Cytochrome P450 29 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01641 511 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01641 511 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01641 511 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01641 511 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01641 511 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01641 511 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01641 511 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01641 511 PANTHER CYTOCHROME P450 FAMILY MEMBER 27 501 - -
Rops5g01641 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Rops5g01641 511 Pfam Cytochrome P450 86 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g01641 511 SUPERFAMILY Cytochrome P450 46 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01641 Rops-Chr5 34216607 34222442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01641 1 371 Cytochrome P450 AT5G38450 65.782 3.68e-171 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01641 K10717 - gmx:100812567 875.93