Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01615 ATGGATCCTCCTCGGCGAGCTCCACGCCCAGTGATCGACCCTGTACCTAAGTTCCGCCAAGTCGGTTTTTTCACTCCCGGAGCCCCACCCGAACGCTCTCAATCGGGTCCACCAGACCCGAATCACTCTTCTCCTCCTGTCGCCGATAACTCTCACTCCCTCTCGCCGGTGATGATTCCGCCGCCGCGTCACCTCTCCGATAACCTCCTCCTGTACTCTCGTCCCGCTGCCTCGCCTCTCCGTGCTGAATCCATCGCAGCCGGTGGCGGCGGTTACGAAGCTCCCGTGTCTCCGGCGCCGTCGTCTTCGTACTCCAGCAGGATCGCCGCCGTCGGTGATGGAAGCTTCTTTGACGGCAGAGGAAAGGGGAACAGTGCCGGCGGAAAGGTGGCGGCATCTTCGTTTCCTCGTGGAGGATTCGACTTGACGGCGATGAAGGCTAGTGTTGTTCCGGCGAGTGAGTTGACCACTGTTTCCGTGGTGAATGATTCGCTTGGGATTCCCGAAAAAGAAAAAGCAAACAAAGGAGGAGGGTCCACTGTGGAAGTCAAAGACCAACCTACTAGTTCAAAACCACAGAAACCAAAAACCTCAAAAGCTGAAAGACGTGCTCTTCAAGAAGCTCAAAGAGCTGCGAAGGCTGCTGCAAAAGCCGAAGGAAATAAGGCATCTGGAACTGTGGCTTCATCAAATGCAAAACCAGCTAAAGCTGTAAAGCCTGCACAGAAAGTTGATAATGCATCAGTTGCAGCCTCTGAGAAGAAGGGGGGTGATTGTCCACCGGAAAAGGATAGAAAGAAAGATGCTCCTCAACCACGCATGCAGTATGATGACAAGAACCGAGTGGACAAAGCTAAACGTCGTGCTGTGGTGAAACAAACTGAAGCTAGGAACAGGGTTGAGTTGTTCAGGCATTTACCACAATATGAACATGAGAGTCAGCTTCCCGATCTTGAGGCAAAGTTTTTCCATCTTTATCCTGTGCATCCTGCTGTTTATAAGGTGGGTTTGCAGTACCTATCTGGAGATATATCTGGTGGCAATGCTCGTTGTATTGCAATGCTTCAAGCATTTCAAGAGGCCATCAAGGACTATAGTGTTCCACCTGAGAAGACTCTTGTGAGAGACTTAACAGCAAAAATTAGTAGTTATGTATCATTTCTTATCGAGTGTCGACCTCTGTCAATCAGCATGGGGAATGCAATTAGATTTCTCAAAAGTCGGATAGCCAAGCTACCTTTAGCTCTTTCTGAGTCAGAGGCAAAAACTTCTCTCCAGTCAGATATTGAACATTTTATAAGTGAGAAGATCATACTAGCCAACAAGGTGATAGTCAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACTTATGGGTCATCATCAGCAATTGAAATGATTCTTTTACATGCACATGAATTAGGAAAACAGTTTCGTGTTGTGGTAGTTGACTCTCGCCCAAAGCTTAGAGGGCAACTTTTACTTCGCAGGCTGGTGCAGAAAGGTCTTAGCTGTACATACACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTTACTCGAGTTTTTCTGGGTGCTTCATCAGTATTGGCTAATGGAACAGTATATTCAAGAGTTGGGACTGCATGTGTTGCAATGGTTGCTCATGCATTCCGTGTACCTGTCATAGTATGTTGTGAGGCTTATAAATTTCATGAAAGGGTACAGCTGGATTCAATATGCTCGAATGAACTTGGTGACCCTGATGTCATTTCAAATGTTCTGGGTAGAGAGGATGTCAACTACTTGGATGGTTGGGCTGATGTTGAAAATCTTCAACTTTTAAATCTGATTTATGATGCAACACCTTCAGACTATGTTTCAATGATAGTCACAGATTATGGCATGGTTCCCCCTACAAGTGTGCCTGTAATTGTAAGAGAATATGGGAGAGAACAGGTCTGGATAAATTAG 1965 0.4646 MDPPRRAPRPVIDPVPKFRQVGFFTPGAPPERSQSGPPDPNHSSPPVADNSHSLSPVMIPPPRHLSDNLLLYSRPAASPLRAESIAAGGGGYEAPVSPAPSSSYSSRIAAVGDGSFFDGRGKGNSAGGKVAASSFPRGGFDLTAMKASVVPASELTTVSVVNDSLGIPEKEKANKGGGSTVEVKDQPTSSKPQKPKTSKAERRALQEAQRAAKAAAKAEGNKASGTVASSNAKPAKAVKPAQKVDNASVAASEKKGGDCPPEKDRKKDAPQPRMQYDDKNRVDKAKRRAVVKQTEARNRVELFRHLPQYEHESQLPDLEAKFFHLYPVHPAVYKVGLQYLSGDISGGNARCIAMLQAFQEAIKDYSVPPEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLALSESEAKTSLQSDIEHFISEKIILANKVIVKHAVTKIRDGDVLLTYGSSSAIEMILLHAHELGKQFRVVVVDSRPKLRGQLLLRRLVQKGLSCTYTHINAVSYIMHEVTRVFLGASSVLANGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDVISNVLGREDVNYLDGWADVENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWIN* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01615 654 Gene3D - 439 646 IPR042529 -
Rops5g01615 654 SUPERFAMILY NagB/RpiA/CoA transferase-like 324 646 IPR037171 -
Rops5g01615 654 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 50 650 - -
Rops5g01615 654 MobiDBLite consensus disorder prediction 159 289 - -
Rops5g01615 654 Pfam Initiation factor 2 subunit family 344 636 IPR000649 GO:0044237
Rops5g01615 654 MobiDBLite consensus disorder prediction 1 61 - -
Rops5g01615 654 MobiDBLite consensus disorder prediction 256 289 - -
Rops5g01615 654 MobiDBLite consensus disorder prediction 86 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01615 Rops-Chr5 33539146 33549423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01615 5 653 Eukaryotic Initiation Factors Gene Family AT5G38640 66.517 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01615 K03680 - gmx:100775998 1018.07