Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01613 ATGCATGCCAGCGGTTCTTATCTCAAGAATAACTGCAGACAAATGCAAAGAAATTCTTCATCATTTGTCCCAAATCTTCATCAACAGGGATGTTTTGATCTAAGCCAACAATATGTAAAAAATCAAGTAGGGTTCTCCCCGGACTGGCGTGAGCATCCTGATATGCGCTACAACCGTCATGTCATTAAAAATAGAATTGCTGCAATTTTCAGTTCCAGGATTCATAACGGGCAAGCAAAACAGTTATCTGATATTGCAACTATTCTGGAATACAAGCTATTTATTCATGCTGCTTCAAAGGAGGAGTATATGAACCAGGAGACATTGAGACAGCGAATGCAAATTCAAGTCAATGAGATGCGTAGGAAAAAAGGCAGTCGACAACAAGTTGATAGCTCTAATACTTCCACATATAAGACAGTGTCTTTTTCTGGGTATTTGCATGCTAGGTCTAATGGAAGTCTACCGGAACCTACTTTTCAGAAAGTGGCTAGTCCTATCATTAATGGTGCAGTGACTGCAAACGATAATTATGGCTCTACAAAAAGAGGACTATTTCCCCCTTCTATTGTTCATGAACCGGTTTCTGGTGGTGGAAGCAATCTCAAAGTTGGCTCCAAATCAATTAGTTCCTATTTTCCTCAGCAACAGGCAGATGATTTGGAGATGGATCTGATAAAAAAAAGAAATTGTTCGGGAACTGTCCAGAAAAATGAATCTTCGGCTTTACTTACTACAATGGGAAAATCCCTCCAATCTGAAACTTTAAATATGATGATCCCTCAACATGTCTCAAGGGAAATTTTAGAAGTTTCCAATCTTTTTCCTGGCTTGAACTCTACTTCAAGCCTTGGAGATATCAGGCAATATCAACCCCAGAAGTTGGATTTACAACAGAATTTCAAACATTTTATGCAGCCTTATGAGCTTTGTGGTAAAGCTTCTCCTGCTCAGTTTAGTTCATGCTTTGTAGATCAGGGTGAACATTGTGGTCATATGTTAGGGCAGCAAACATTGAAGCAGTCACAGCTTCCTACAAGACTTCTCAATGCGGATGGACAGCTCACTTCAGAAAACTCTGCCGGTAATTTTGGTTTAGATGGATCTGCTAATGTAAATTCACACAATAATTCTGAAGTTTCAGTTGAAAAGAGGATCTTGCCTGCATTTTTTTGCTATGAGAATTTAAACAATGTTTCAGGGAATAATAAAATTTCCTTTTCGAAATTTCTGCATTCAACAGTTAGTAGTAAAGGGATATGTACCTATGAACAGCATAGCAAATTGTTACTGCATTCTAAAGACTGTCAAAGTGATGACTGTCTTACATGTTGCCCTCGGAAATTATCACATGTGACTGATATTCTTGAGCATCATTTGGAATTTCCAAGTAGCAAGATTATGGATTCCATTGTAAGAGATAATGATGCCCCTTCTGATAATTTTGAAGCCGTGCTACCACCTACCAAAAGACTAAAAAGGGAGTTTGCTTTTGGTGTCTCTTTGATTAACAATGCAAGTACTGATCAATGGACTCACAAGATAGCTCAACCTTATTCTTCTGAAGCGCTTCCAAAATTGCAGCAACAGCCAGAATCTCCCCTATCTTCCAAATTGCAGCACTTCCAAAATTCCATTGTAAGCGATAATGATGCCCCTTCTGGTAATTGTGAAGCCATGCTACCATCTACCAAAAGACTAAAACGGGAGTTTGCTTTTGGTGTTTCTTTGATTAACAATGCAAGTACTGATCAATGGACTCACAAGATAGCTCAACCTTATTCTTCTGAAGCACTTCCAAAATTGCAGCAACAGCCAGAATCTCTCCTCTCTTCCAAATTGCAGCACTTCCAAAATTCCATTGTAAGATATAATGATGCCCCTTATGGTAATTCTGAAGCCATACCATCTCCCAAAACACTAAAAATGGAGTCTGCTTTTGGTGGCTCTTTGATTAACAATGCAAGTTCTGATCAATGGACTCACAAGATGGCTCAACCTTATTCTTCTGAAGTGCTTCCAAAATTGCAGCAACAGCCTGAATCTCCCCTCTCTTGCAAATTGCAGCACTTCCAAAATTCCATTGTAAGAGATAATGATGCCCCTTATGGTAATTCTGAAGCCATACCGTCTACCGAAACACTAAAAGTGGGGTCTGCTTGTGATGGCTCTTTGATTAACAATGCTAGTTCTGATCAATGGACTCAAAAGATGGCTCAACCTTATTCTTCTGAAGCACTTCCAAAATTGCAGCAACAGCCTGAATCTCCCCTCTCTTGCAAATTGCAGCACTTCCAAAATTCCATTGTAAGAGATAATGATGCCCCTTATGGTAATTCTGAAGCCATACCATCTACCGAAACACTGAAAGTGGGGTCTGCTTGTAGTGGCTCTTTGATTAACAATGCTAGTTCTGATCAATGGACTCACAAGATGGCTCAACCTTATTCTTCTGAAGCACTTCCAAAATTGCAGCAACAGCCTGAATCTCCCCTCTCTTCTATCTATTCTGAAGTTATGGAGTGCAATGTGGAACAATGTACAAATCAAATAATTGACTCTATGAGCACTTGTGAGATGAACAATGTGATTGATGACACATTTGGACAAAGTTCAAAGTGTGAAATCATTCCCTCTGAAAGCTTAGAAGAAGCTGTTCATTTATCAGACGAGCCAGACCCAAAAAGCCATGATGAGATAGACAGCAGCAACTTTAAGGAAACTGTCATTGGATCAAATTCCAGTATGCATACCCTCTGCAAAGATCCTATTGCTGCAGATATAGAGGACATACAAGGCAGAACTGGATTCAACCAGGCTGGGATAAACGATGAAAAGAAAGTTAGTGAGCCAAAAGCTGATCAAGAGAAAGAAACAAAGTCCTCAAATATAACAGCTAATATCGTTTCCTTAACTGAGTTTTTCACAAGTAAACAAATAAGGGAACACATTACGAGTCTGAGAAAGCAATCTGTTCAGAGTATAACTAAGGAAGAAATGGAACTTGCTGATAAAACATGCCAATTATGTGCAATGGAAGAGCTTTATTTTGCACAAGTGCCAATTTATTGCATACGTTGTGGCATCCGCATCAAGCGAAATGCAAACTATTACTATAGAAAGGCAGAAGAAATTGATACACAATGTTGCTTTTGCACCCTGTGCTATAAGAATTGTCAAGGTGGGTACATTAAATTCAATGAGATATCTGTTTCCAAGACACTTCTTGGTCAAAAGAGAAATGACGAAGTATTTCCAGAACAGTGGGTTCAATGTAATAAATGCGAAAGATGGCAACATCAAGTATGTGCGCTGTATAACTGGAAAAGAGATTTGAACTTCAGTTCGCAGTACATATGTCCTATATGTCGCTTAAAGGAAATTGAAGATGGAATGCATGTACCCTTACCAAAGACTGCTACTTTTGGTGCTAAGGACTTGCCAAGCACCATGCTTAGTGACCACATAGAGAAAAGACTTTTTAAGTGTCTCATGCAAGAGAGAGCAGAATGGGAAAAAATCGAAGGGAATAAGAATCTTGATGAGGTTTTACCAGCAGCAACCCTTTCTGTTAGAGAAGTATTATCTGTTGACAAACAATTAAAAGTGAAGAAGCAGTTTCGGGACATCTTTTTGGAGGAGAATTACCCTGCTGAGTTCCCTTATAGATCAAAAGTTATTCTTCTGTTTCAGCAGATTGAAGGAGCAGATGTATGCCTTTTTGGAATGTATGTCCAGGAGTTTGGCTCGGAATGTGGCTATCCCAATCAACGTTGTGTATATATTTCTTATCTTGATTCTGTTAAATATTTTAGGCCAGAAAGAAAGACTATGAGCGGAGAAGCTCTTCGTACCTTTGTTTACCATGAGATATTGATTGGATACCTTGACTTTTGCAAGAAACGAGGTTTCACAACTTGCTACATATGGGCCTGCCCTTCTTCAAAGGGAGAAGATTATGTACTATATTGCCATCCTGACACTCAAAAGACCCCAAAGACTGCTAAACTACGGCACTGGTATCATTCAATGCTAAGAAAGGCTGCTGAAGAAAATATCGTTGTTGGTTTAACTAACATATATGATCATTTCTTTGTTCCTACTGGAAAAGCTGACTCCAAGGTAACAGCTGCTCGTTTGCCATATTTTGATGGAGATTGCTGGTCTTGTACTTCTATGGATCTAGCCATGAGCATTGAACAAGAGAGTGGAGGAGATTATGAAAAGTTATTGAAGAAACTAGTGCCGAAAAGAACTTTAAAGGCCATGGGACATGTAAATCCTTCGAAAGGCTCTGCCAAAGACATTCTCGTGATGCATAAACTGGGCCAATCTATATTGAATGCCAAGGAAAGCTTCATCATGGTTCACCTTCAGTATGTATGTGTGCACTGCCATGAAGTGATAGTGTCTGGGAAGCGGTGGTTTTGCACTGACTGCAAGAAATATCAGGAGTGTGAAAGATGCCATACTGCTGACTCACACACTTCAACCAGTGGCGAGAAACATAAACTTTGTCAGGAGCTCATGGATGATATCCCTTTTGATACTAAAGAGAATGATATCATCCTGGACAATGGATTATTTGAGAATAGATATAATTTTTTGAGCTTCTGCCAGAAGAATCTGCTTCAGTTTGACACACTCCGCCGTGCCAAATATTCCTCGATGATGATCCTCTATCATCTAAAAAATCCTACTCTGCTGACTGTTGGAACTATATGCATTTGCTGTAAACACAAAGTATTCCAACAGAGCTGGAAATGTGAGATTTGTCCCGAGGTCACTGTATGCTCTGCATGTTACAAGGAGAGAGGTGCTGAATGCCATGCACACAAGTTGAGTCAAACTTATTCAACATCAACAGGAAATGATGAGTCAAAGCAGAAATCAGTACTGATGCAGGAACTCCTACAAGTTATACAGCATGCATCTCAATGTTGCTCAACTAAAATTCAACCATGCTCTTATCCAAACTGTCTTCAAATAAAAAAGCTGTTCACTCATGCCAGTAGGTGTACTATTCGAGCTTCTGGGGGCTGCCCATATTGTAAGAAGGCATGGCTGGGACTAACTGTTCACTCGAGGAATTGTAGTAACTCAGAATGTCGCATCCCACGTTGCATGGATCTGAAGAAGCATGCAGAATGGATAGCAATGCAATCTGAATCTCGGCGTAGAGCTGCAGTGATGAAAAGCAACAGAGAACTCACTGATCATTGA 5223 0.3967 MHASGSYLKNNCRQMQRNSSSFVPNLHQQGCFDLSQQYVKNQVGFSPDWREHPDMRYNRHVIKNRIAAIFSSRIHNGQAKQLSDIATILEYKLFIHAASKEEYMNQETLRQRMQIQVNEMRRKKGSRQQVDSSNTSTYKTVSFSGYLHARSNGSLPEPTFQKVASPIINGAVTANDNYGSTKRGLFPPSIVHEPVSGGGSNLKVGSKSISSYFPQQQADDLEMDLIKKRNCSGTVQKNESSALLTTMGKSLQSETLNMMIPQHVSREILEVSNLFPGLNSTSSLGDIRQYQPQKLDLQQNFKHFMQPYELCGKASPAQFSSCFVDQGEHCGHMLGQQTLKQSQLPTRLLNADGQLTSENSAGNFGLDGSANVNSHNNSEVSVEKRILPAFFCYENLNNVSGNNKISFSKFLHSTVSSKGICTYEQHSKLLLHSKDCQSDDCLTCCPRKLSHVTDILEHHLEFPSSKIMDSIVRDNDAPSDNFEAVLPPTKRLKREFAFGVSLINNASTDQWTHKIAQPYSSEALPKLQQQPESPLSSKLQHFQNSIVSDNDAPSGNCEAMLPSTKRLKREFAFGVSLINNASTDQWTHKIAQPYSSEALPKLQQQPESLLSSKLQHFQNSIVRYNDAPYGNSEAIPSPKTLKMESAFGGSLINNASSDQWTHKMAQPYSSEVLPKLQQQPESPLSCKLQHFQNSIVRDNDAPYGNSEAIPSTETLKVGSACDGSLINNASSDQWTQKMAQPYSSEALPKLQQQPESPLSCKLQHFQNSIVRDNDAPYGNSEAIPSTETLKVGSACSGSLINNASSDQWTHKMAQPYSSEALPKLQQQPESPLSSIYSEVMECNVEQCTNQIIDSMSTCEMNNVIDDTFGQSSKCEIIPSESLEEAVHLSDEPDPKSHDEIDSSNFKETVIGSNSSMHTLCKDPIAADIEDIQGRTGFNQAGINDEKKVSEPKADQEKETKSSNITANIVSLTEFFTSKQIREHITSLRKQSVQSITKEEMELADKTCQLCAMEELYFAQVPIYCIRCGIRIKRNANYYYRKAEEIDTQCCFCTLCYKNCQGGYIKFNEISVSKTLLGQKRNDEVFPEQWVQCNKCERWQHQVCALYNWKRDLNFSSQYICPICRLKEIEDGMHVPLPKTATFGAKDLPSTMLSDHIEKRLFKCLMQERAEWEKIEGNKNLDEVLPAATLSVREVLSVDKQLKVKKQFRDIFLEENYPAEFPYRSKVILLFQQIEGADVCLFGMYVQEFGSECGYPNQRCVYISYLDSVKYFRPERKTMSGEALRTFVYHEILIGYLDFCKKRGFTTCYIWACPSSKGEDYVLYCHPDTQKTPKTAKLRHWYHSMLRKAAEENIVVGLTNIYDHFFVPTGKADSKVTAARLPYFDGDCWSCTSMDLAMSIEQESGGDYEKLLKKLVPKRTLKAMGHVNPSKGSAKDILVMHKLGQSILNAKESFIMVHLQYVCVHCHEVIVSGKRWFCTDCKKYQECERCHTADSHTSTSGEKHKLCQELMDDIPFDTKENDIILDNGLFENRYNFLSFCQKNLLQFDTLRRAKYSSMMILYHLKNPTLLTVGTICICCKHKVFQQSWKCEICPEVTVCSACYKERGAECHAHKLSQTYSTSTGNDESKQKSVLMQELLQVIQHASQCCSTKIQPCSYPNCLQIKKLFTHASRCTIRASGGCPYCKKAWLGLTVHSRNCSNSECRIPRCMDLKKHAEWIAMQSESRRRAAVMKSNRELTDH* 1741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01613 1740 SUPERFAMILY RING/U-box 1437 1497 - -
Rops5g01613 1740 MobiDBLite consensus disorder prediction 936 961 - -
Rops5g01613 1740 Gene3D - 1455 1505 IPR043145 -
Rops5g01613 1740 SUPERFAMILY FYVE/PHD zinc finger 1086 1126 IPR011011 -
Rops5g01613 1740 PANTHER CBP/P300-RELATED 82 1735 IPR013178 GO:0004402|GO:0006355|GO:0016573
Rops5g01613 1740 MobiDBLite consensus disorder prediction 945 959 - -
Rops5g01613 1740 SMART KAT11_2 1176 1469 IPR013178 GO:0004402|GO:0006355|GO:0016573
Rops5g01613 1740 SUPERFAMILY TAZ domain 1622 1715 IPR035898 -
Rops5g01613 1740 Coils Coil 103 123 - -
Rops5g01613 1740 SUPERFAMILY RING/U-box 1551 1605 - -
Rops5g01613 1740 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1141 1568 IPR031162 GO:0004402
Rops5g01613 1740 ProSitePatterns Zinc finger ZZ-type signature. 1575 1601 IPR000433 GO:0008270
Rops5g01613 1740 ProSiteProfiles Zinc finger PHD-type profile. 1049 1126 IPR019787 -
Rops5g01613 1740 ProSiteProfiles Zinc finger TAZ-type profile. 1625 1711 IPR000197 -
Rops5g01613 1740 SMART PHD_3 1051 1124 IPR001965 -
Rops5g01613 1740 Gene3D TAZ domain 1622 1737 IPR035898 -
Rops5g01613 1740 ProSiteProfiles Zinc finger ZZ-type profile. 1457 1518 IPR000433 GO:0008270
Rops5g01613 1740 Pfam TAZ zinc finger 1634 1708 IPR000197 -
Rops5g01613 1740 SMART TAZ_2 1628 1709 IPR000197 -
Rops5g01613 1740 Pfam Histone acetylation protein 1178 1392 IPR013178 GO:0004402|GO:0006355|GO:0016573
Rops5g01613 1740 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1082 1127 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01613 Rops-Chr5 33474674 33485549 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Rops5g01613 HAT_KAT11 3.5e-28 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01613 K04498 - aprc:113866525 1325.84