Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01567 ATGATTAGTTCAATAAGCCGTGATATTGATGAGCAAACTCCTTTGCAAGCAAGGCTTAACAAGCTTACATCATCCATTGGGAAGGTTGGTTTGGCTGTGGCTTTTCTTTTTCTTCTTGTTTTGTTGGTTCGTTACTTCACAGGGAACACAAAGGATGAGAATGGTGTTAGGGAGTACAATGGAAGCAAGACGAAGTTTGATGATATAATGAATGCAGTTGTGGGAATTGTTGCTGATGCAGTTACCATTGTTGTTGTTGCAATCCCTGAGGGTCTGCCACTGGCTGTGACTTTGACACTGGCTTATTCAATGAAGAAAATGATGGCTGATAAAGCTTTGGTGAGAAAGCTCTCTGCATGTGAGACAATGGGGTCTGCTACAACTATTTGTACAGATAAAACAGGCACACTCACACTGAACCAGATGAAGGTGACAAAGTTTTGGCTTGGCCTAGAACCTGTGGAAGAACAAGCCTACTCATCAATTGCTCCATATGTTCTTCAATTGATAAAGGAAGGAGTGGCTCTCAACACAACTGGTGGTGTGCACAAGTCTAAATCAGGTTCTGAATTTGAGTTTTCAGGTAGTCCCACTGAAAAAGCAATCCTATCTTGGGCTGTCTTGGAATTGAACATGGAAATGGAGCACTTGACCAAAAGCTGTTCCATCATTCATGTTGAGACCTTCAACTCAAAGAAGAAAAGAAGTGGGGTTTTGTTGAGAAGGAAGGCAGACAACACAGTCAATGCACATTGGAAAGGAGCAGCAGAGATGGTACTAAAAATGTGTTCAAGATACTATGATGCTTCTGGCCTTGTGAAAGATCTTGACAATGAAACCATGTTGAAGTTTGAACACATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGTATTGCCTTGGCACATGTAGAAGTATCAGAAGAAGAGCATGGAGATGAAGAAGGCAACAAAATGGTAAAAGACAATGGTCTAACACTTCTAGGACTTGTTGGTATCAAGGATCCATGTCGTCCAGGGGTGAAGACAGCCGTGGAAGCATGCCAACATGCTGGTGTGAATGTCAAAATGATCACAGGTGACAATGTTTTCACTGCAAAAGCTATAGCAACTGAATGTGGCATACTTAAGCCTAATCAGGACACAAATGGAGCAGTGGTTGAAGGAGAGGAATTTCGCAACTACACTCATGAAGAGAGATTGGAGAAAGTTGACAAAATCTGTGTGATGGCAAGATCCTCTCCTTTTGATAAACTTCTAATGGTTCAATGCCTTAAACAGAAAGGCCATGTAGTTGCTGTCACCGGGGATGGAACAAATGATGCTCCAGCACTCAAGGAAGCTGATATTGGACTTTCTATGGGAATTCAAGGAACTGAAGTTGCCAAAGAGAGTTCAGATATTGTAATATTGGATGACAATTTTGCATCTGTGGTCACCGTAGTAAGGTGGGGAAGATGTGTTTATAACAACATCCAGAAGTTTATTCAATTTCAATTGACAGTGAATGTTGCTGCACTTGCAATCAACTTTGTGGCAGCAGTGTCAGCAGGTGAAGTGCCACTTACAGCAGTGCAATTATTATGGGTGAACTTGATCATGGACACATTGGGTGCTTTGGCTCTTGCAACTGAGAAGCCTACCATGGAGTTGATGGACAACCCACCAGTTGGTAGAACCAAACCTCTCATCACTAACATCATGTGGAGGAATCTGTTAGCTCAAGCTTTGTACCAGATAGCAATTTTGTTGACCCTTCAATTCAAAGGTGAGTCTATCTTTGGTGTGACATCAGGGGTGAATGACACATTGATTTTCAATACATTTGTTCTTTGCCAAGTGTTCAATGAGTTCAATGCAAGGAAGATGGAGAAGAAGAATGTTTTCAAAGGCATACAGAGGAGCAAGTTGTTTTTGGGAATTATTGGTATAACAATAGTACTTCAGGTGGTGATGGTTGAGTTTCTCAAGAAGTTTGCTGATACAGAGAGGTTGAATTGGGGTCAATGGGCTATTTGTATTGGTCTTGCTTCAGTTTCATGGCCAATTGGTTGGGTTGTGAAGTTGATACCTGTCACAGATGAACCATTATTCAATTTTTTGAGTAAGATGAAGAGAAGATGA 2124 0.4134 MISSISRDIDEQTPLQARLNKLTSSIGKVGLAVAFLFLLVLLVRYFTGNTKDENGVREYNGSKTKFDDIMNAVVGIVADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADKALVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPVEEQAYSSIAPYVLQLIKEGVALNTTGGVHKSKSGSEFEFSGSPTEKAILSWAVLELNMEMEHLTKSCSIIHVETFNSKKKRSGVLLRRKADNTVNAHWKGAAEMVLKMCSRYYDASGLVKDLDNETMLKFEHIIQGMAASSLRCIALAHVEVSEEEHGDEEGNKMVKDNGLTLLGLVGIKDPCRPGVKTAVEACQHAGVNVKMITGDNVFTAKAIATECGILKPNQDTNGAVVEGEEFRNYTHEERLEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVVRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELMDNPPVGRTKPLITNIMWRNLLAQALYQIAILLTLQFKGESIFGVTSGVNDTLIFNTFVLCQVFNEFNARKMEKKNVFKGIQRSKLFLGIIGITIVLQVVMVEFLKKFADTERLNWGQWAICIGLASVSWPIGWVVKLIPVTDEPLFNFLSKMKRR* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01567 707 Gene3D - 1 150 - -
Rops5g01567 707 PRINTS H+-transporting ATPase (proton pump) signature 284 302 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops5g01567 707 PRINTS H+-transporting ATPase (proton pump) signature 435 451 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops5g01567 707 PRINTS H+-transporting ATPase (proton pump) signature 467 492 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops5g01567 707 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 136 341 IPR023299 GO:0000166
Rops5g01567 707 NCBIfam HAD-IC family P-type ATPase 408 516 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops5g01567 707 NCBIfam HAD-IC family P-type ATPase 73 152 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops5g01567 707 PRINTS P-type cation-transporting ATPase superfamily signature 351 361 - -
Rops5g01567 707 PRINTS P-type cation-transporting ATPase superfamily signature 459 471 - -
Rops5g01567 707 PRINTS P-type cation-transporting ATPase superfamily signature 130 144 - -
Rops5g01567 707 PRINTS P-type cation-transporting ATPase superfamily signature 329 340 - -
Rops5g01567 707 PRINTS P-type cation-transporting ATPase superfamily signature 435 454 - -
Rops5g01567 707 SUPERFAMILY HAD-like 128 540 IPR036412 -
Rops5g01567 707 Pfam haloacid dehalogenase-like hydrolase 127 449 - -
Rops5g01567 707 PANTHER CATION TRANSPORTING ATPASE 1 692 - -
Rops5g01567 707 Pfam Cation transporting ATPase, C-terminus 520 690 IPR006068 -
Rops5g01567 707 Pfam E1-E2 ATPase 3 108 - -
Rops5g01567 707 NCBIfam calcium-translocating P-type ATPase, PMCA-type 7 692 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Rops5g01567 707 Gene3D - 453 694 - -
Rops5g01567 707 ProSitePatterns E1-E2 ATPases phosphorylation site. 132 138 IPR018303 -
Rops5g01567 707 Gene3D - 181 335 IPR023299 GO:0000166
Rops5g01567 707 Gene3D - 336 452 IPR023214 -
Rops5g01567 707 FunFam Calcium-transporting ATPase 140 336 - -
Rops5g01567 707 SFLD p-type atpase 112 488 IPR044492 -
Rops5g01567 707 FunFam Calcium-transporting ATPase 452 694 - -
Rops5g01567 707 SUPERFAMILY Calcium ATPase, transmembrane domain M 7 692 IPR023298 -
Rops5g01567 707 SFLD C1.7: P-type atpase like 112 488 - -
Rops5g01567 707 FunFam Calcium-transporting ATPase 330 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01567 Rops-Chr5 32591313 32593436 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01567 1 706 Primary Pumps ATPases AT3G22910 72.638 0.0 995
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01567 K01537 - gmx:100793918 1219.14