Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01566 ATGTCAATGACCTTGCCGTCAAACTTGGAACGCATTGAGATACTACTCAATGCACCAAAAACCATCAGTGTATCCAATAAAAGATGGCACTCTGCATTCATGACCATCTATTGTTCCCGAGCCTTCATGTCACACTTCACTCTCAACAAAACCAAACCAAAAATCTCACCACCTTCTCCATCTTTCACCCTGCTTGATTTCAATCCACACCACTCCTTTTCTATTGATCAAGCTAGTCTAACAGATATTATCAAAGAGAAAGACGTTGAGGGTCTTAAGAAACATGGTGGGGTTGAAGGGGTGGCTGCAGCACTTGAAACCAACGTTGAGTTTGGTATCAAAGGTGATGATGCTCAAGACATTGCACGTAGACAACAAGTGTTTGGTTCCAACACCACCAACAAACCTCCTTCAAAAGGGTTCCTTCATTTCGTGATAGAAGCCTTTAAGGATGTCACCATTCTCATCCTCTTGGTCTGTGCAGCTCTTTCACTAGGCTTTGGCATCAAGGAGCATGGACTCAAAGAAGGTTGGTATGATGGTGGCAGCATTTTTATTGCTGTGTTTATTGTGATTTCATTGTCTTCAATAAGCAACTTCAGGCAGAATAAACAATTCGACAAGTTATCACAAATGAGCAATGATATACAAATTGATGTTATGAGAAGTGGGCCAAAAGATCTCAATCTTTGA 693 0.4113 MSMTLPSNLERIEILLNAPKTISVSNKRWHSAFMTIYCSRAFMSHFTLNKTKPKISPPSPSFTLLDFNPHHSFSIDQASLTDIIKEKDVEGLKKHGGVEGVAAALETNVEFGIKGDDAQDIARRQQVFGSNTTNKPPSKGFLHFVIEAFKDVTILILLVCAALSLGFGIKEHGLKEGWYDGGSIFIAVFIVISLSSISNFRQNKQFDKLSQMSNDIQIDVMRSGPKDLNL* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01566 230 Gene3D - 115 226 - -
Rops5g01566 230 SUPERFAMILY Calcium ATPase, transmembrane domain M 96 215 IPR023298 -
Rops5g01566 230 Pfam Cation transporter/ATPase, N-terminus 95 164 IPR004014 -
Rops5g01566 230 Gene3D - 147 202 - -
Rops5g01566 230 SMART Cation_ATPase_N_a_2 94 169 IPR004014 -
Rops5g01566 230 PANTHER CATION TRANSPORTING ATPASE 60 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01566 Rops-Chr5 32564979 32565671 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01566 12 226 Primary Pumps ATPases AT3G22910 53.670 1.00e-65 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01566 K01537 - gmx:100793918 340.117