Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01564 ATGTCAATGAACTTGCTCACAAACATGGATCGCATTGATATACTACTCAATGCACCAAAAACTATCAGTGTATCCAATAAAAGATGGCACTCTGCATTCATGACCATCTATTGTTCCCGAGCCTTCATGTCTCATTTCACTCTCAACAAAACCAAACCAAAAATCTCACCACCTTCTCCATCTTTCACCCTGCTGGATTTCAATCCACACCACTCCTTTTCTATTGATCAAGCTAGTCTAACAGATATTATCAAAGATAAAGACGTCGAGGGTCTTAAGAAACATGGTGGGGTTGAAGGGGTGGCTGCAGCACTGGAAACCAACGTTGAGTTTGGTATCAAAGGTGATGATGCTCAAGACATTGCACGTAGACAACAAGTGTTTGGTTCCAACACCACCAACAAACCACCTTCCAAAGGCTTCTTTCATTTTGTAATGGAAGCCTTTAAGGATGTCACAATCCTCATCCTTTTGGTTTGTGCTGCTCTTTCACTAGGCTTTGGCATCAAGGAGCATGGACTCAAAGAAGGTTGGTATGATGGTGGTAGCATTTTTGTTGCTGTGTTTATTGTCATTTCCTTATCTTCAATAAGCAACTTCAGGCAGAATAGACAATTCGACAAGTTATCTCAAGTGAGCAATGATATACAAATTGATGTTATGAGAAGTGGGCGCCGCCAAAAGATCTCAATCTTTGAGATTGTGGTTGGTGATGTTGTTTGGTTGAAGATTGGAGATCAAGTCCCAGCTGATGGATTATTCATAGAAGGACATTCATTGAGAGTTGATGAATCAAGCATGACAGGGGAGAGTGATCATGTGGAGATTAATAGTAACCATCACCCTTTCTTGTTATCAGGTACCAAGGTGGTTGATGGGTATGCTAAGATTCTTGTCACCTCAGTTGGTATGAACACAACATGGGGCCAAATGATTAGTTCAATAAGCCGTGATATTGATGAGCAAACTCCTTTGCAAGCAAGGCTTAACAAGCTTACATCATCCATTGGGAAGGTTGGTTTGGCTGTGGCTTTTCTTGTTCTTCTTGTTTTGTTGGTTCGTTACTTCACAGGGAACACAAAGGATGAGAATGGTGTTAGGGAGTACAATAGAAGTAAGACTAAGTTCGATGATATAATGAATGCAGTTGTGGGAATTGTTGCTGATGCAGTTACCATTGTTGTTGTTGCAATCCCTGAGGGTCTGCCACTGGCTGTGACTTTGACACTTGCTTATTCAATGAAGAAAATGATGGCTGATCAAGCTTTGGTGAGAAAGCTCTCTGCATGTGAGACAATGGGGTCTGCTACAACTATCTGTACTGATAAAACAGGTACACTCACACTGAACCAGATGAAGGTGACAAAGTTTTGGCTTGGCCTAGAACCTGTGGAAGAACAAGCCTACGCATCAATTGCTCCATATGTTCTTCAATTGATAAAGGAAGGAGTGGCTCTCAACACAACTGGTGGTGTGCACAAGTCTAAATCAGGTTCTGAATTTGAGTTTTCAGGTAGTCCCACTGAAAAAGCAATCCTATCTTGGGCTGTCTTGGAATTGAACATGGAGATGGAGCACCTGACCAAAAGCTGTTCCATCATTTATGTTGAGACCTTCAACTCAAAGAAGAAAAGAAGTGGGGTTTTGTTGAGAAGGAAGGCAGACAACACAGTCAATGCACATTGGAAAGGAGCAGCAGAGATGGTACTAAAAATGTGTTCAAGATACTATGATGCTTCTGGCCTTGTGAAAGATCTTGACAATGAAACCATGTTGAAGTTTGAACACATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGTATTGCCTTGGCACATGTAGAAGTATCAGAAGAAGAGCTTGGAGATGAAGGAGGCAACAAAATGGTGAAAGACAATGGTCTAACACTTCTAGGACTTGTTGGTATCAAGGATCCATGTCGTCCAGGGGTGAAGACAGCTGTGGAAGCATGCCAACATGCTGGTGTGAATGTCAAAATGATCACAGGTGACAATGTTTACACTGCAAAAGCTATAGCAACTGAATGTGGCATACTTAAGCCTAATCAGGACACAAATGGAGCAGTGGTTGAAGGAGAGGAATTTCGCAACTACACACATGAAGAGAGATTGGAGAAAGTTGACAAAATCTGTGTGATGGCAAGATCCTCTCCTTTTGATAAACTTCTAATGGTTCAATGCCTTAAACAGAAAGGCCATGTAGTTGCTGTCACCGGGGATGGAACAAATGATGCTCCAGCACTCAAGGAAGCTGATATTGGACTTTCTATGGGAATTCAAGGTACTGAAGTGGCAAAAGAGAGTTCAGATATTGTAATATTGGATGACAATTTTGCATCTGTGGTCACAGTAGTAAGGTGGGGAAGATGTGTTTATAACAACATTCAGAAGTTTATTCAATTTCAATTGACAGTGAATGTTGCTGCACTTGCAATCAACTTTGTGGCAGCAGTGTCAGCAGGTGAAGTGCCACTTACAGCAGTGCAATTATTATGGGTGAACTTGATCATGGACACATTGGGTGCTTTGGCTCTTGCAACTGAGAAGCCTACCATGGAGTTGATGGACAACCCACCAGTTGGTAGGACCAAACCTCTCATCACTAACATCATGTGGAGGAATCTGTTAGCTCAAGCTTTGTACCAGATAGCAATTTTGTTGACCCTTCAATTCAAAGGTGAGTCTATCTTTGGTGTGACATCAGGGGTGAATGACACATTGATTTTCAACTCATTTGTTCTTTGCCAAGTGTTCAATGAGTTCAATGCAAGGAAGATGGAGAAGAAGAATGTTTTCAAAGGCATACATAGGAGCAAGTTGTTTCTGGGAATTATTGGGATTACAATAGTACTTCAGGTGGTCATGGTTGAGTTTCTCAAGAAGTTTGCCGATACAGAGAGGTTGAATTGGGGTCAATGGGCTATTTGCATTGGTCTTGCTGCAGTTTCATGGCCAATTGGTTGGGTTGTGAAGTTGATACCTGTCCCAGATGAACCATTATTCAATTTTTTGAGTAAGATGAAGAGAAAATGA 3054 0.4152 MSMNLLTNMDRIDILLNAPKTISVSNKRWHSAFMTIYCSRAFMSHFTLNKTKPKISPPSPSFTLLDFNPHHSFSIDQASLTDIIKDKDVEGLKKHGGVEGVAAALETNVEFGIKGDDAQDIARRQQVFGSNTTNKPPSKGFFHFVMEAFKDVTILILLVCAALSLGFGIKEHGLKEGWYDGGSIFVAVFIVISLSSISNFRQNRQFDKLSQVSNDIQIDVMRSGRRQKISIFEIVVGDVVWLKIGDQVPADGLFIEGHSLRVDESSMTGESDHVEINSNHHPFLLSGTKVVDGYAKILVTSVGMNTTWGQMISSISRDIDEQTPLQARLNKLTSSIGKVGLAVAFLVLLVLLVRYFTGNTKDENGVREYNRSKTKFDDIMNAVVGIVADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQALVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPVEEQAYASIAPYVLQLIKEGVALNTTGGVHKSKSGSEFEFSGSPTEKAILSWAVLELNMEMEHLTKSCSIIYVETFNSKKKRSGVLLRRKADNTVNAHWKGAAEMVLKMCSRYYDASGLVKDLDNETMLKFEHIIQGMAASSLRCIALAHVEVSEEELGDEGGNKMVKDNGLTLLGLVGIKDPCRPGVKTAVEACQHAGVNVKMITGDNVYTAKAIATECGILKPNQDTNGAVVEGEEFRNYTHEERLEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVVRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELMDNPPVGRTKPLITNIMWRNLLAQALYQIAILLTLQFKGESIFGVTSGVNDTLIFNSFVLCQVFNEFNARKMEKKNVFKGIHRSKLFLGIIGITIVLQVVMVEFLKKFADTERLNWGQWAICIGLAAVSWPIGWVVKLIPVPDEPLFNFLSKMKRK* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01564 1017 Gene3D - 437 790 IPR023214 -
Rops5g01564 1017 SUPERFAMILY HAD-like 438 850 IPR036412 -
Rops5g01564 1017 PANTHER CATION TRANSPORTING ATPASE 63 1002 - -
Rops5g01564 1017 SFLD Haloacid Dehalogenase 422 798 - -
Rops5g01564 1017 Pfam Cation transporting ATPase, C-terminus 830 1000 IPR006068 -
Rops5g01564 1017 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 446 651 IPR023299 GO:0000166
Rops5g01564 1017 Gene3D - 147 999 - -
Rops5g01564 1017 FunFam Calcium-transporting ATPase 640 790 - -
Rops5g01564 1017 Gene3D - 450 646 IPR023299 GO:0000166
Rops5g01564 1017 CDD P-type_ATPase_Ca_PMCA-like 121 878 - -
Rops5g01564 1017 PRINTS H+-transporting ATPase (proton pump) signature 745 761 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops5g01564 1017 PRINTS H+-transporting ATPase (proton pump) signature 777 802 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops5g01564 1017 PRINTS H+-transporting ATPase (proton pump) signature 594 612 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops5g01564 1017 FunFam Calcium-transporting ATPase 450 646 - -
Rops5g01564 1017 NCBIfam HAD-IC family P-type ATPase 718 826 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops5g01564 1017 NCBIfam HAD-IC family P-type ATPase 383 462 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops5g01564 1017 ProSitePatterns E1-E2 ATPases phosphorylation site. 442 448 IPR018303 -
Rops5g01564 1017 NCBIfam calcium-translocating P-type ATPase, PMCA-type 89 1002 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Rops5g01564 1017 Gene3D - 115 316 - -
Rops5g01564 1017 Pfam E1-E2 ATPase 217 418 - -
Rops5g01564 1017 Pfam Cation transporter/ATPase, N-terminus 95 164 IPR004014 -
Rops5g01564 1017 Pfam haloacid dehalogenase-like hydrolase 437 759 - -
Rops5g01564 1017 SMART Cation_ATPase_N_a_2 94 169 IPR004014 -
Rops5g01564 1017 FunFam Calcium-transporting ATPase 762 1004 - -
Rops5g01564 1017 SUPERFAMILY Calcium ATPase, transduction domain A 217 314 IPR008250 -
Rops5g01564 1017 SUPERFAMILY Calcium ATPase, transmembrane domain M 96 1001 IPR023298 -
Rops5g01564 1017 SFLD p-type atpase 422 798 IPR044492 -
Rops5g01564 1017 PRINTS P-type cation-transporting ATPase superfamily signature 263 277 - -
Rops5g01564 1017 PRINTS P-type cation-transporting ATPase superfamily signature 661 671 - -
Rops5g01564 1017 PRINTS P-type cation-transporting ATPase superfamily signature 745 764 - -
Rops5g01564 1017 PRINTS P-type cation-transporting ATPase superfamily signature 440 454 - -
Rops5g01564 1017 PRINTS P-type cation-transporting ATPase superfamily signature 639 650 - -
Rops5g01564 1017 PRINTS P-type cation-transporting ATPase superfamily signature 769 781 - -
Rops5g01564 1017 FunFam Calcium-transporting ATPase 189 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01564 Rops-Chr5 32535547 32538600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01564 12 1016 Primary Pumps ATPases AT3G22910 68.744 0.0 1341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01564 K01537 - gmx:100793918 1714.12