Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01552 ATGACGATTGGAAGCCTTGCACCTAAGGCAGAGAAGGAAAAATCAAGGAAGAACAAGGCAATTGTTGATGAGAATGCTCCTTTGATACCCAAGACTCATGAAACTGATGCTGGTTTTGATGATTTTAATGGAGCTTCATTTTCTGGTGCTGTTTTCAACTTGTCCACCACAATTATTGGTGCTGGAATTATGGGGTTGCCTGCATGTGTGAAAAAGTTGGGGATGGTGCCTGGTCTTCTTGCTATAATCTTCACTGCTTTCTTGACAGAGAAGTCAATTGAGTTCATGATTAGGTTTTCCAGGGCAGGGAAATTTTCTTCTTATGGAAGTCTCATGGGTGATGCCTTTGGGAAATTTGGAAAAGCTCTGTTACAGATATGTATTATAGTCAATAACATTGGTGTGCTGATTATTTACATGATTATTATTGGTGATGTGATTTCTGGAACATCTTCAAATGGAGTTCACCATTCTGGTGTCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTGGGCGTACATTTGTTGTTGTTTTTGTGACACTTGCTGTGTTTGCACCTTTGGTCAGTTTTAAGAGAATTGATTCATTGAGATTCACATCTGCATTATCAGTTGCACTAGCAGTTGTTTTTCTTGTCATTGCTGTGGGAATCTCAATTGTCAAGATTATAAGTGGAGGCCTTGGGATGCCAAGACTCTTCCCGGTCATTGCTGATGCAGCATCAGTTTTTGAACTGTTCACTGTAGTGCCTGTGCTTGTGACAGCCTTTATCTGCCACTACAATGTTCACAGCATAGATAGTGAACTTGAGGACTCCTCACAGATGCGCGGGGTTGTACGTTCTTCCCTTGTTCTATGCTCTTCAGTGTACGTATTGACAAGCTTTTTTGGGTTCCTCCTATTTGGTGAAGGAACTCTTGATGACGTGCTTGCCAATTTTGATACTGATCTTGGAATTCCTTTTGGTTCTGTGCTCAATGACGCTGTTCGTTTTAGCTATGCTGCACATCTTGTGCTTGTATTTCCAGTTGTCTTTTATGCAGTACGGATCAATTTAGATGGTCTTATATTTTCTTCTTCGAGGCCTTTGGTTCTAGATAACTTCAGATTTGCATCAATTACTATTGCCCTTGTCATTGCTATCTTCCTGGGAGCAAATTTCATACCCAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACAGCTGCTGTTTGTGTAGGATTCATATTTCCTGCAGCCATCACTCTTAGGGATCGTTACAACATAGCAACTAAAACAGACAAGATTCTATCTATCCTTATGATAGTCTTGGCAGTTTTCTCAAATGCTGTGGCTATATACAGTGATGCCTATACCTTGATCAAGAAGAACAAAGCTTAA 1383 0.4071 MTIGSLAPKAEKEKSRKNKAIVDENAPLIPKTHETDAGFDDFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLLAIIFTAFLTEKSIEFMIRFSRAGKFSSYGSLMGDAFGKFGKALLQICIIVNNIGVLIIYMIIIGDVISGTSSNGVHHSGVLEGWFGVHWWTGRTFVVVFVTLAVFAPLVSFKRIDSLRFTSALSVALAVVFLVIAVGISIVKIISGGLGMPRLFPVIADAASVFELFTVVPVLVTAFICHYNVHSIDSELEDSSQMRGVVRSSLVLCSSVYVLTSFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRFSYAAHLVLVFPVVFYAVRINLDGLIFSSSRPLVLDNFRFASITIALVIAIFLGANFIPSIWDIFQFTGATAAVCVGFIFPAAITLRDRYNIATKTDKILSILMIVLAVFSNAVAIYSDAYTLIKKNKA* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01552 460 PANTHER AMINO ACID TRANSPORTER 38 442 - -
Rops5g01552 460 Pfam Transmembrane amino acid transporter protein 45 449 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01552 Rops-Chr5 32419493 32424585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01552 3 458 Amino Acid or Auxin Permease AAAP Family AT3G30390 66.667 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01552 K14207 - gmx:100791286 726.472