Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01550 ATGGCCACCCCATCACCTTCATATCTGGAGTTCACAATGCAGAGGCGTAAGGCTGAGCTGGTAGCTCCGACAAAACCTACCCCTAATGAAGTGAAACTACTCTCAGACATAGATGACCAAGATGGCCTACGTTTCCAAATTCCAGTGATACAGTTCTATCACTACAATCCATCAATGGAAGGGAAAGACCCTGCTGAGATCATTAAAGAGGCATTGGCCAAAACACTTGTGTTTTACTATCCATTTGCAGGTAGGCTCAGGGAAGGGCCTGGTAGGAAACTCATGGTGGATTGTAATGGGGAGGGTGTTTTGTTCATTGAGGCAGATGCAGATGTCACAGTGAAGCAATTTGGTGATGCTCTTCAACCTCCCTTCCCATCATTGCAGCTAGACAATGATGATGGTGAGGTTCGCATGCTTCTCGTTGTTAATGCTCGTGGTAGGTTTAACCCTCCATTACCAAATGGTTACTATGGCAACGCTATTGCATTTTCTGCTGCAGTCACCTCTGGAAGGAAGCTATGTGAGAATCCATTGGGATATGCATTGGAGTTAGTAAGGAAAGCAAAAGTTGATGTAACTGACGAGTACATGCATTCATTGGCAGATTTTTTGGTCATCAAGGGAAGGCCTCACTTTACTGTGGTGAGATCCTATTGTGTGTCTGATGTGACACGAGCTGGGTTTGGAGAGGTTGAGTTTGGGTGGGGGAAGGCTGTTTATGGAGGGCCTGCCATTGGAGGAGTGCCTGGTGAGGGAAGCTTTTATTTACCCTTTAAGAATGATAAAGGAGAGGAAGGTTTGGTGATACCTGTTAGTTTACCATTTGAAGCCATGGAGAGGTTTGTTAATGAGATGGATAGCATGGTTAAGAATCAAATCAAACCTACTAAGGATGGTCCAAACTCTGGTTTCATTGTTTCTGCATTGTAG 933 0.448 MATPSPSYLEFTMQRRKAELVAPTKPTPNEVKLLSDIDDQDGLRFQIPVIQFYHYNPSMEGKDPAEIIKEALAKTLVFYYPFAGRLREGPGRKLMVDCNGEGVLFIEADADVTVKQFGDALQPPFPSLQLDNDDGEVRMLLVVNARGRFNPPLPNGYYGNAIAFSAAVTSGRKLCENPLGYALELVRKAKVDVTDEYMHSLADFLVIKGRPHFTVVRSYCVSDVTRAGFGEVEFGWGKAVYGGPAIGGVPGEGSFYLPFKNDKGEEGLVIPVSLPFEAMERFVNEMDSMVKNQIKPTKDGPNSGFIVSAL* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01550 310 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 114 - -
Rops5g01550 310 Gene3D - 120 285 IPR023213 -
Rops5g01550 310 Pfam Transferase family 16 127 - -
Rops5g01550 310 Pfam Transferase family 135 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01550 Rops-Chr5 32371500 32375204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01550 133 282 Monolignol Biosynthesis Gene Families AT5G48930 28.931 2.89e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01550 K19861 - gmx:100797017 259.225