Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01543 ATGGCGAGATCGAGGCGGGGGTCGAGGACGACAAGAGGAGGGATGATGAGGGAGCGTTGTGGGTTCCTGGAGCCTCGTGTTCGTTGTTATACGAGGTCTATCGTCGAGGGTCTCAGACATGTTCATCAAAACGGGTTCGTTCACTACGACATAAAGCTACAAAGCATCCTCGTATTCGATGATGAGGAAATCAAAATCGTTGATTTTGGTCTTGCTAAGGAAACAAGGGTGAAACAAAGTAAGAGTGAGAAATTCGAATGCAGGGGTACTCCTCTGTTTATGTCGCCGGAATCGATGAACGATAGCGAGCATGAGTCACCGGTGAATATATGGGCTCTTGGGTGTGCGATGGTGGAGATGATTATCGGAAAACCAGCATGGAATATGGAAAAGGGATCAAGCATGTGGTCCTTGTTGCTTCAAATTGGGGTGGGAGAAGAATTGCCGAAAATACCCGAGGAAATTTCAGAAGAAGGAAAGGATTTTCTTGAGAAGTGTTTCGTTAAGGATCCAAGAAAGCGATGGACCGCAAAGATGCTTTTGAATCACCCTTTTGTTGCTGTTGAATCACCAGAATGA 579 0.4611 MARSRRGSRTTRGGMMRERCGFLEPRVRCYTRSIVEGLRHVHQNGFVHYDIKLQSILVFDDEEIKIVDFGLAKETRVKQSKSEKFECRGTPLFMSPESMNDSEHESPVNIWALGCAMVEMIIGKPAWNMEKGSSMWSLLLQIGVGEELPKIPEEISEEGKDFLEKCFVKDPRKRWTAKMLLNHPFVAVESPE* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01543 192 Gene3D Transferase(Phosphotransferase) domain 1 11 191 - -
Rops5g01543 192 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01543 192 Pfam Protein kinase domain 17 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01543 192 SUPERFAMILY Protein kinase-like (PK-like) 18 187 IPR011009 -
Rops5g01543 192 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 21 187 - -
Rops5g01543 192 SMART serkin_6 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01543 Rops-Chr5 32221071 32221649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01543 21 189 MAP Kinase Kinase Kinase AT5G67080 57.988 3.56e-70 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops5g01543 Pkinase 3.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01543 - - aip:107641670 256.529