Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01537 ATGGAGAGAGTGAAGGAAGATGAAGAACTGAAAGAATGTCTTGCAATCTTTTACAAGTTACCAATAACGCACCCACAAGCTCAATTAAACAAAAAAGAGGGTCAACTTCAGAATCAAGGTTTGCACTTCACACACCCCAGAAGAAAAAAAGTGATTTTTTTCCATTATGGGGTCTTTCTTCTGCTGATTAGTGAGCCTCTGTTCTGTAGTACTAGTCTTCTGCAAGATGATTTCATTGTTTGGATATCAAGAGAGATCGAAGAATGGTGGTACAAGAAACGTGCTCATCTCAGTCGATCTGCAAGTGAGCCTAGTGTAACAACTCTTCCAATACGAACAAATGGACTGGGAACAAGCACTGACTTTAGCGCATCTCTCACTAGTTCCATAGCCACGTCAAGGTCAGAAAATCTTCAGAAAAATTCCCATTTCACTTGGTGGAATCATCAAAACAAAGATCGGTTTGCTTCAGCATCAGGCATTCTAAAGTATTCATACAAAGAAATTCAAAAGGCCACACAAAATTTTACGACTACCTTGGGACAAGGATCATTTGGCACGGTTTATAAAGCCACAATGCCCACCGGAGAGGTGGTAGCTGTGAAGGTGCTCGCACCCAATTCTAAACAAGGGGAGAGAGAATTCCAAACAGAGGTGTTTCTGCTGGGAAGACTGCATCACCGGAATCTTGTGAATTTGGTTGGATATTGTGTAGATAAAGGACAACGCATCCTGGTTTATCAGTTCATGAGTAATGGAAGCTTAGCAAATCTTTTATATGATGAAGGGAAGGAGTTGAGTTGGGATGAAAGGCTGCAAATTGCTATTGATATTTCACACGGAATAGAGTATCTTCATGAAGGAGCAGTGCCACCTGTCATACATCGCGATTTGAAGTCTGCCAACATATTGCTAGATCATTCAATGAGAGCTAAGGTTGCTGACTTTGGGCTCTCGAAGGAAGAGATGTTTGATGACCGGAATTCTGGTCTTAAAGGTACATATGGTTACATGGATCCAGCATACATTTCCACAAGCAAGTTAACAACCAAGAGTGACATTTACAGTTTTGGTATCATACTTTTTGAGCTCATCACTGCTATCCACCCACATCAAAATTTGATGGAATATATTAACCTTGCTGCAATGGATCATGATGGTATAGATGGGATACTTGACAAGCAACTTGTGGGAAAATGCAATCTTTCAGAAGTGAGGCAGCTTGCTAAAATTGCACACAAATGCTTGCACAAAACACCTAAGAAACGCCCCTCTATAGTTGAAGTTTCACAAGGTATATCAAGGATAGAGCAAAGGAGACTGCGCCATGTGATGGAAGATAACTTGTCATTTGCAAGCAATAACTTTTCACGAGCTGTGAGTCGATTAGAAGATCGACAAGTTGAATTAAGTAGGATAGCTAGCATGAAGAACATCACAGAAACTGTATGA 1452 0.4063 MERVKEDEELKECLAIFYKLPITHPQAQLNKKEGQLQNQGLHFTHPRRKKVIFFHYGVFLLLISEPLFCSTSLLQDDFIVWISREIEEWWYKKRAHLSRSASEPSVTTLPIRTNGLGTSTDFSASLTSSIATSRSENLQKNSHFTWWNHQNKDRFASASGILKYSYKEIQKATQNFTTTLGQGSFGTVYKATMPTGEVVAVKVLAPNSKQGEREFQTEVFLLGRLHHRNLVNLVGYCVDKGQRILVYQFMSNGSLANLLYDEGKELSWDERLQIAIDISHGIEYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEMFDDRNSGLKGTYGYMDPAYISTSKLTTKSDIYSFGIILFELITAIHPHQNLMEYINLAAMDHDGIDGILDKQLVGKCNLSEVRQLAKIAHKCLHKTPKKRPSIVEVSQGISRIEQRRLRHVMEDNLSFASNNFSRAVSRLEDRQVELSRIASMKNITETV* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01537 483 SUPERFAMILY Protein kinase-like (PK-like) 146 430 IPR011009 -
Rops5g01537 483 ProSitePatterns Protein kinases ATP-binding region signature. 180 202 IPR017441 GO:0005524
Rops5g01537 483 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 148 249 - -
Rops5g01537 483 Gene3D Transferase(Phosphotransferase) domain 1 250 458 - -
Rops5g01537 483 CDD STKc_IRAK 180 436 - -
Rops5g01537 483 SMART serkin_6 174 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01537 483 Pfam Protein tyrosine and serine/threonine kinase 176 431 IPR001245 GO:0004672|GO:0006468
Rops5g01537 483 ProSiteProfiles Protein kinase domain profile. 174 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01537 483 PANTHER OS01G0750732 PROTEIN 79 438 - -
Rops5g01537 483 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 250 459 - -
Rops5g01537 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Rops5g01537 483 Gene3D Phosphorylase Kinase; domain 1 136 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01537 Rops-Chr5 32129752 32138166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01537 144 438 Receptor kinase-like Gene Family AT1G79620 42.949 1.61e-70 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Rops5g01537 PK_Tyr_Ser-Thr 4.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01537 - - gmx:100819995 711.835