Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01528 ATGGATGAGAAGATGCTAGTGTATGAGTACATGGAAAATAAAAGCTTTGATGCCATTTTGTTTAACAAAGCAAAAAGATCTTCACTGGACTGGAGAAGGCGCTTCAACATTATATGTGGAATAGCTAGAGGGCTTCTTTATCTTCACCAAGATTCCAGATTTAGGATCATCCATAGGGATCTTAAGGCAAGCAACATTTTACTTGACAAAGAGATGAACCCAAAGATATCAGACTTTGGAATGGCTAGAATTTTTGGTACGGATCAGACAGAAGCAAATACAGTGAGAGTTGTTGGAACATATGGCTATATGTCCCTTGAATATGCTATGGATGGGATCTTCTCAGTGAAATCTGATGTTTTTAGTTTTGGGGTTCTTGTGCTGGAGATTATAAGTGGAAAAAATAACAGAGGGTTCTATTATGCAAACAAGGAATTGAATCTTCTGGGGCATGCATGGAAGCTGTGGAAAGAAGGAAATGCATTGGAACTGATTCATTCATCCATTGACAATTCATATTCACCATCTGAAGTACTTAGATGCATACAAGTTGGGCTCTTATGTGTACAAGAGCGAGCAGAAGCTTACAGAATACCAAGAAGCTTTTCAGGAATTCAATGCACTATTGCCATTCAGAGTTTACAGAATACCTCCTCAAGGTCACAGGGGCAAGATACAAATTAA 684 0.3845 MDEKMLVYEYMENKSFDAILFNKAKRSSLDWRRRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDKEMNPKISDFGMARIFGTDQTEANTVRVVGTYGYMSLEYAMDGIFSVKSDVFSFGVLVLEIISGKNNRGFYYANKELNLLGHAWKLWKEGNALELIHSSIDNSYSPSEVLRCIQVGLLCVQERAEAYRIPRSFSGIQCTIAIQSLQNTSSRSQGQDTN* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01528 227 SUPERFAMILY Protein kinase-like (PK-like) 3 191 IPR011009 -
Rops5g01528 227 Pfam Protein tyrosine and serine/threonine kinase 3 136 IPR001245 GO:0004672|GO:0006468
Rops5g01528 227 SMART serkin_6 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01528 227 ProSitePatterns Serine/Threonine protein kinases active-site signature. 56 68 IPR008271 GO:0004672|GO:0006468
Rops5g01528 227 Gene3D Transferase(Phosphotransferase) domain 1 11 216 - -
Rops5g01528 227 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 194 - -
Rops5g01528 227 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g01528 227 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 11 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01528 Rops-Chr5 31776189 31777156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01528 2 191 Receptor kinase-like Gene Family AT4G11530 66.492 7.52e-88 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops5g01528 PK_Tyr_Ser-Thr 6.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01528 - - aprc:113860154 369.392