Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01526 ATGTCACAACATGGAAACCCCACTCAAAGGGTGGCCTTCTACTTCTCCGAAGCTCTAACACACAAAATATCTGCAGAAAGAGAGAAAGTGAAAGATAAGAATTTGGTGGAGCCTACTATGACTACTACCACTACTTCAGAGGAGTTAACACTCTCTTACAAAGCTTTAAACGATGCTTGCCCTTTTTCAAAGTTTGCACATTTAACTGCTAATCAAGCTATACTTGAAGCTACAGAAGGACCCAGTGAGATTCACATAGTTGATTTTGGGATTGTTCAAGAGATTTAA 288 0.3924 MSQHGNPTQRVAFYFSEALTHKISAEREKVKDKNLVEPTMTTTTTSEELTLSYKALNDACPFSKFAHLTANQAILEATEGPSEIHIVDFGIVQEI* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01526 95 Pfam GRAS domain family 2 93 IPR005202 -
Rops5g01526 95 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 93 IPR005202 -
Rops5g01526 95 ProSiteProfiles GRAS family profile. 1 95 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01526 Rops-Chr5 31620469 31620756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01526 1 95 GRAS Transcription Factor Family AT5G66770 57.895 3.98e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops5g01526 GRAS 3.3e-26 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01526 - - adu:107477343 135.961