Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01519 ATGAGGCTTGTCATCTCAGCTCTTTGTGTTCTTGTGCTATTTTCATATGCAGTTGCTTATGATCCTTTGGATCCAAATGGAAACATAACAATCAAATGGGATGTTATGTCTTGGACACCAGATGGATATGTGGCTGTGGTAACAATCCATAATTTCCAAATGTTTCGGCACATCATGAATCCTGGATGGACCTTGGGATGGACATGGGCTAAGAAAGAAGTTATATGGTCCATGGTTGGAGCTCAAACCACAGAACAAGGAGACTGCTCTAAGTTCAAAGGCAACATACCTCACTGCTGCAAGAAAACTCCCACAGTTGTGGACTTACTCCCTGGTGTACCTTACAATCAGCAATTCACAAACTGTTGTAAGGGTGGAGTGGTGACAGCATGGGGCCAAGACCCTTCACAATCTATCTCATCCTTCCAAGTGAGTGTAGGACAAGCTGGAACCTCAAACAAGACAGTTAAACTCCCCAAGAATTTCACTCTCTTGGCTCCAGGGCCAGGCTATACTTGTGGCCCTGCAAAGGTTGTTCCTTCCACCGCTTTCCTTACACCTGACAAGCGCCGCAAGACTCAAGCACTAATGACGTGGAATGTTACCTGCACATACTCACAATTTCTAGCAAGAAAAAACCCAAGTTGTTGTGTATCTTTGTCATCCTTCTATAATGAAACGATTACCACTTGTCCCTCTTGTGCTTGTGGCTGCCAGAACAAGAAGAACTGTGTGAAGGGTGACTCTAAGATTCTCAGCATGTTGGGGGTTCACACTCCAAAGAAAGACAATGAACCATTGCTACAATGCACTCATCATATGTGTCCAATCAGGGTCCACTGGCATGTGAAGCAAAACTATAAGGACTATTGGAGAGTCAAGATTGCCATAACAAATTTCAATTACAGGATGAATTACTCTCTCTGGACTCTTGCTATTCAGCATCCAAATCTTAACAATGTCACCCAAGTTTTCAGCTTTGATTACAAGCCTCTTCTTCCATATGAGTCCATAAATGACACTGGCATGTTCTATGGCATGAAATACTTTAATGATCTACTAATGGAAGCTGGACCAACTGGGAATGCTCAATCAGAGGTGCTTCTTCAGAAGAACAAGGACACATTCACATTCAAACAAGGGTGGGCATTTCCTCGCAAGGTCTACTTTAATGGTGATGAATGCATGCTGCCTCCACCTGACACCTATCCATTTCTCCCTAATTCTGCACCTGCAAGCCTACTTAACTTCCAAGCATTTATCTTCCCATTGCTTTTATTGATAGCAGTTTGGTGA 1296 0.4321 MRLVISALCVLVLFSYAVAYDPLDPNGNITIKWDVMSWTPDGYVAVVTIHNFQMFRHIMNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNIPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVVTAWGQDPSQSISSFQVSVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTAFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITTCPSCACGCQNKKNCVKGDSKILSMLGVHTPKKDNEPLLQCTHHMCPIRVHWHVKQNYKDYWRVKIAITNFNYRMNYSLWTLAIQHPNLNNVTQVFSFDYKPLLPYESINDTGMFYGMKYFNDLLMEAGPTGNAQSEVLLQKNKDTFTFKQGWAFPRKVYFNGDECMLPPPDTYPFLPNSAPASLLNFQAFIFPLLLLIAVW* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01519 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0016020
Rops5g01519 431 PANTHER PROTEIN COBRA 8 423 IPR006918 GO:0010215|GO:0016020
Rops5g01519 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01519 Rops-Chr5 31450537 31453008 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01519 1 430 COBRA Gene Family AT3G29810 64.480 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01519 - - gmx:100798678 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01519 5 31450537 31453008 Rops8g00449 8 8509280 8512932 PCT
Rops8g00448 8 8506598 8509162 Rops5g01519 5 31450537 31453008 PCT